Factsheet for AT5G15380.1

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, nucleus
Any Predictor:	cytoskeleton, cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytoskeleton
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G017920.1	Barley	cytosol	9.62	74.07
Os11t0109200-00	Rice	plastid	17.15	64.07
TraesCS6A01G124200.1	Wheat	peroxisome	21.15	61.68
TraesCSU01G224900.1	Wheat	peroxisome	35.9	59.73
CDY40934	Canola	nucleus	39.9	57.51
CDY40933	Canola	cytosol	57.69	56.6
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	38.94	53.41
TraesCS3D01G454900.1	Wheat	peroxisome	38.46	53.22
Zm00001d044187_P001	Maize	cytosol	20.51	52.24
AT5G14620.1	Thale cress	nucleus	51.28	51.12
KRH69576	Soybean	nucleus	43.11	50.09
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	38.46	49.18
HORVU6Hr1G081790.1	Barley	nucleus	41.35	47.78
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	32.69	47.0
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	39.42	46.15
Zm00001d048516_P001	Maize	nucleus	44.39	45.94
Os03t0110800-01	Rice	nucleus	43.75	45.73
GSMUA_Achr8P33680_001	Banana	cytosol	36.7	44.99
HORVU3Hr1G098970.1	Barley	nucleus	36.54	44.97
EES00541	Sorghum	nucleus	43.75	44.9
OQU93413	Sorghum	nucleus	43.59	44.81
TraesCS5A01G241800.1	Wheat	nucleus	43.59	44.01
EER95283	Sorghum	nucleus	40.54	43.92
TraesCSU01G124200.1	Wheat	nucleus	42.31	43.78
TraesCSU01G140500.1	Wheat	nucleus	42.15	43.76
TraesCS5D01G248300.1	Wheat	nucleus	43.11	43.53
TraesCS6A01G338800.1	Wheat	nucleus	41.99	43.31
TraesCS6D01G319500.2	Wheat	nucleus	41.83	43.14
Bra004388.1-P	Field mustard	cytosol	56.09	43.0
TraesCS5A01G553300.3	Wheat	nucleus	41.99	42.95
TraesCS4A01G267400.1	Wheat	nucleus	29.33	42.76
TraesCS4D01G046800.1	Wheat	nucleus	40.87	42.43
TraesCSU01G140600.1	Wheat	nucleus	42.15	42.42
GSMUA_Achr11P...	Banana	nucleus	31.25	42.3
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	37.66	40.66
TraesCS4B01G012300.2	Wheat	cytosol	20.67	40.57
GSMUA_Achr3P23940_001	Banana	nucleus	38.94	40.43
OQU87185	Sorghum	cytosol	15.22	40.25
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	37.5	40.21
HORVU4Hr1G089730.3	Barley	nucleus	22.76	39.78
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	37.5	39.73
Zm00001d027329_P002	Maize	nucleus	44.55	39.32
TraesCS3A01G461500.1	Wheat	nucleus	40.22	39.1
Os12t0108900-00	Rice	cytosol, nucleus	21.79	38.2
CDX95928	Canola	golgi	55.93	37.13
TraesCS3A01G067600.1	Wheat	nucleus	39.1	32.15
TraesCS6D01G114500.1	Wheat	mitochondrion	22.6	29.56
AT3G17310.1	Thale cress	cytosol	24.52	21.55
HORVU7Hr1G000490.1	Barley	cytosol	0.48	9.38

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:2.20.70.90	Gene3D:3.40.50.150	EntrezGene:831390
ProteinID:AAS45433.1	ProteinID:AED92154.1	ArrayExpress:AT5G15380	EnsemblPlantsGene:AT5G15380	RefSeq:AT5G15380	TAIR:AT5G15380
RefSeq:AT5G15380-TAIR-G	EnsemblPlants:AT5G15380.1	TAIR:AT5G15380.1	InterPro:C5_MeTfrase	ProteinID:CAB89347.1	ProteinID:CAB89348.1
Symbol:DRM1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0003886
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006306	GO:GO:0006346	GO:GO:0006464	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987
GO:GO:0016043	GO:GO:0016458	GO:GO:0016740	GO:GO:0019538	GO:GO:0032259	GO:GO:0040029
GO:GO:0050832	GO:GO:0051567	GO:GO:0090116	InterPro:IPR001525	InterPro:IPR015940	InterPro:IPR030380
RefSeq:NP_197042.2	PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3
UniProt:Q9LXE5	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	InterPro:UBA	UniParc:UPI000034F213
SEG:seg	:	:	:	:	:

Description

DRM1DNA (cytosine-5)-methyltransferase DRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE5]

Coordinates

chr5:+:4991347..4994924

Molecular Weight (calculated)

70922.0 Da

IEP (calculated)

4.968

GRAVY (calculated)

-0.472

Length

624 amino acids

Sequence
(BLAST)

001: MVMSHIFLIS QIQEVEHGDS DDVNWNTDDD ELAIDNFQFS PSPVHISATS PNSIQNRISD ETVASFVEMG FSTQMIARAI EETAGANMEP MMILETLFNY
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.