Factsheet for Bra004388.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40933	Canola	cytosol	62.9	80.5
CDX95928	Canola	golgi	91.65	79.36
HORVU4Hr1G017920.1	Barley	cytosol	6.76	67.9
Os11t0109200-00	Rice	plastid	13.02	63.47
TraesCS6A01G124200.1	Wheat	peroxisome	16.34	62.15
TraesCSU01G224900.1	Wheat	peroxisome	26.66	57.87
AT5G15380.1	Thale cress	cytoskeleton, cytosol, nucleus	43.0	56.09
Bra008749.1-P	Field mustard	nucleus	39.8	53.91
Bra023480.1-P	Field mustard	cytosol	28.87	52.81
Bra023479.1-P	Field mustard	cytosol	21.25	51.95
TraesCS3D01G454900.1	Wheat	peroxisome	28.5	51.44
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	28.75	51.43
Zm00001d044187_P001	Maize	cytosol	15.36	51.02
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	29.12	48.57
KRH69576	Soybean	nucleus	31.08	47.11
HORVU6Hr1G081790.1	Barley	nucleus	31.2	47.04
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	24.94	46.77
GSMUA_Achr8P33680_001	Banana	cytosol	28.38	45.38
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	28.87	44.09
HORVU3Hr1G098970.1	Barley	nucleus	27.15	43.59
Os03t0110800-01	Rice	nucleus	31.94	43.55
EER95283	Sorghum	nucleus	29.98	42.36
TraesCSU01G140500.1	Wheat	nucleus	31.08	42.1
OQU93413	Sorghum	nucleus	31.33	42.01
TraesCS6A01G338800.1	Wheat	nucleus	31.2	41.98
EES00541	Sorghum	nucleus	31.33	41.94
TraesCSU01G124200.1	Wheat	nucleus	30.96	41.79
Zm00001d048516_P001	Maize	nucleus	30.84	41.63
TraesCS6D01G319500.2	Wheat	nucleus	30.84	41.49
TraesCS5A01G241800.1	Wheat	nucleus	31.45	41.42
TraesCS4A01G267400.1	Wheat	nucleus	21.74	41.36
TraesCS5D01G248300.1	Wheat	nucleus	31.2	41.1
TraesCS5A01G553300.3	Wheat	nucleus	30.59	40.82
TraesCSU01G140600.1	Wheat	nucleus	31.08	40.81
GSMUA_Achr11P...	Banana	nucleus	23.1	40.78
TraesCS4B01G012300.2	Wheat	cytosol	15.72	40.25
TraesCS4D01G046800.1	Wheat	nucleus	29.48	39.93
HORVU4Hr1G089730.3	Barley	nucleus	17.44	39.78
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	28.01	39.18
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	27.76	39.1
Os12t0108900-00	Rice	cytosol, nucleus	17.08	39.04
OQU87185	Sorghum	cytosol	10.93	37.71
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	27.27	37.69
TraesCS3A01G461500.1	Wheat	nucleus	29.24	37.07
GSMUA_Achr3P23940_001	Banana	nucleus	27.15	36.77
Zm00001d027329_P002	Maize	nucleus	31.33	36.07
TraesCS3A01G067600.1	Wheat	nucleus	29.48	31.62
TraesCS6D01G114500.1	Wheat	mitochondrion	17.32	29.56
Bra031188.1-P	Field mustard	nucleus	15.85	22.55
HORVU7Hr1G000490.1	Barley	cytosol	0.86	21.88
Bra022208.1-P	Field mustard	plasma membrane, vacuole	19.66	17.86

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	EnsemblPlantsGene:Bra004388	EnsemblPlants:Bra004388.1
EnsemblPlants:Bra004388.1-P	InterPro:C5_MeTfrase	GO:GO:0003674	GO:GO:0003824	GO:GO:0003886	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0006346	GO:GO:0006464
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009605
GO:GO:0009607	GO:GO:0009987	GO:GO:0016043	GO:GO:0016458	GO:GO:0016740	GO:GO:0019538
GO:GO:0040029	GO:GO:0050832	GO:GO:0051567	GO:GO:0090116	InterPro:IPR001525	InterPro:IPR015940
InterPro:IPR030380	UniProt:M4CJK4	InterPro:Methyltransf_11	PFAM:PF00145	PFAM:PF08241	PFscan:PS50030
PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF46934
SUPFAM:SSF53335	InterPro:UBA	InterPro:UBA-like_sf	UniParc:UPI0002541897	SEG:seg	:

Description

AT5G15380 (E=5e-215) DRM1 | DRM1 (domains rearranged methylase 1); DNA (cytosine-5-)-methyltransferase

Coordinates

chrA07:+:18368050..18373138

Molecular Weight (calculated)

92296.8 Da

IEP (calculated)

6.475

GRAVY (calculated)

-0.385

Length

814 amino acids

Sequence
(BLAST)

001: MDETVAKFIE MGFSMEMIGR AIEETGGENP EPMMILETLF KLSTSSEASS SKSKVIDELI GMGFSEELVI KAIQEHGEKN LEEITNALLS YAEAEKMHET
101: ENEDINNNYL SDDNDDTNLY SGLSSSDEEN ELNSFHGDGR LQDLIKMGYP RKEASIALER CGEIASLAEV VDFIFAAQMA RQLDEFWAAP DEQEVLRINE
201: PPPRRRRLNT DIASDDELIR LPNPMIGFGV PKEPGIITER PVPIPSIARG PPYFYYENVA MTPKGVWAKM SSHLYDIKPE FVDSLYFCAA ARKRGYIHNL
301: PIKNRFEIQP TPHYTIQEEF PLTKKWWPAW DKRTKLNCVL TCIASAQLTN KIRKRLEKHE RDPAVQKDVV DQCKKWNLVW VGKNKAAPLE PYEMERLLGF
401: PNNHTRGISR KDRYKSLGNS FQVDTVAYHL SVLKPLYPKG INVLSLFTGI GGGEVALHRL QIPMKLVVSV EISEVNRNIF RSFWEQTNQR GDLIEFRDVE
501: ELDDHKIEGL MDQYGGFDLV IGGSPCNNLA GANRVSRTGL EGDQSSLFYD YCRILEAVRS KASRMRRRDR YKSLGNSFQV KLKETMFLLR PRRLILLEFT
601: PPLPLPSTDT TQLLHNAFCS KIENFKNKVF DELTTKDEKV LEIGIGTGPN MRYFAARNVN VTLLGLDPNP KMKKYARKAA VRAGLNPKNF RFMQGVGEAI
701: PLEDGSVDAV VATLVLCTVS DVTQTLNEIK RVLRPGGRFI FLEHVAAEDG SLFRRLQKLL DPLQQILADG CHLTRNTREC ILEAGFSGGA QIETVSMYSF
801: PWVTRPHIYG VAYK

Best Arabidopsis Sequence Match ( AT5G15380.1 )
(BLAST)

001: MVMSHIFLIS QIQEVEHGDS DDVNWNTDDD ELAIDNFQFS PSPVHISATS PNSIQNRISD ETVASFVEMG FSTQMIARAI EETAGANMEP MMILETLFNY
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR

Arabidopsis Description

DRM1DNA (cytosine-5)-methyltransferase DRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.