Factsheet for Bra023479.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002360.1-P
Bra002361.1-P
Bra002520.1-P
Bra003735.1-P
Bra008231.1-P
Bra009513.1-P
Bra015801.1-P
Bra018814.1-P
Bra020152.1-P
Bra021203.1-P
Bra022181.1-P
Bra031085.1-P
Bra034318.1-P
Bra036717.1-P
Bra040678.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14620.1	Bra018814.1-P	AT1G49590.1	23524848
AT5G14620.1	Bra003735.1-P	AT1G75950.1	24855943
AT5G14620.1	Bra008231.1-P	AT1G75950.1	24855943
AT5G14620.1	Bra015801.1-P	AT1G75950.1	24855943
AT5G14620.1	Bra031085.1-P	AT2G19520.1	24855943
AT5G14620.1	Bra036717.1-P	AT2G19520.1	24855943
AT5G14620.1	Bra040678.1-P	AT2G19520.1	24855943
AT5G14620.1	Bra034318.1-P	AT2G27040.1	24855943
AT5G14620.1	Bra021203.1-P	AT3G16830.1	24855943
AT5G14620.1	Bra022181.1-P	AT3G16830.1	24855943
AT5G14620.1	Bra002520.1-P	AT3G45980.1	24855943
AT5G14620.1	Bra009513.1-P	AT5G03740.1	24855943
AT5G14620.1	Bra002360.1-P	AT5G21150.1	24855943
AT5G14620.1	Bra002361.1-P	AT5G21150.1	24855943
AT5G14620.1	Bra020152.1-P	AT5G21150.1	24855943

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0109200-00	Rice	plastid	26.43	52.69
CDX85590	Canola	cytosol	82.28	49.1
TraesCS6A01G124200.1	Wheat	peroxisome	29.13	45.33
HORVU4Hr1G017920.1	Barley	cytosol	10.81	44.44
CDX91035	Canola	cytosol	70.27	42.16
Bra008749.1-P	Field mustard	nucleus	61.56	34.11
Zm00001d044187_P001	Maize	cytosol	22.82	31.02
AT5G14620.1	Thale cress	nucleus	57.06	30.35
Bra023480.1-P	Field mustard	cytosol	38.14	28.54
TraesCS4A01G267400.1	Wheat	nucleus	35.74	27.8
KRH69576	Soybean	nucleus	42.04	26.07
HORVU7Hr1G000490.1	Barley	cytosol	2.4	25.0
TraesCS3D01G454900.1	Wheat	peroxisome	33.63	24.83
TraesCSU01G224900.1	Wheat	peroxisome	27.93	24.8
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	33.63	24.62
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	35.74	24.39
Os03t0110800-01	Rice	nucleus	42.04	23.45
HORVU6Hr1G081790.1	Barley	nucleus	37.84	23.33
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	37.24	23.26
OQU93413	Sorghum	nucleus	42.04	23.06
HORVU3Hr1G098970.1	Barley	nucleus	33.93	22.29
EER95283	Sorghum	nucleus	38.44	22.22
TraesCS4D01G046800.1	Wheat	nucleus	39.94	22.13
GSMUA_Achr8P33680_001	Banana	cytosol	33.63	22.0
TraesCS6A01G338800.1	Wheat	nucleus	39.94	21.98
GSMUA_Achr11P...	Banana	nucleus	30.33	21.91
Zm00001d048516_P001	Maize	nucleus	39.34	21.72
EES00541	Sorghum	nucleus	39.34	21.55
TraesCS5A01G241800.1	Wheat	nucleus	39.94	21.52
TraesCS6D01G319500.2	Wheat	nucleus	39.04	21.49
TraesCS5D01G248300.1	Wheat	nucleus	39.64	21.36
TraesCSU01G140500.1	Wheat	nucleus	38.44	21.3
Bra004388.1-P	Field mustard	cytosol	51.95	21.25
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	26.73	20.51
TraesCSU01G140600.1	Wheat	nucleus	38.14	20.48
TraesCSU01G124200.1	Wheat	nucleus	36.94	20.4
TraesCS5A01G553300.3	Wheat	nucleus	36.64	20.0
TraesCS3A01G461500.1	Wheat	nucleus	38.14	19.78
GSMUA_Achr3P23940_001	Banana	nucleus	34.83	19.3
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	33.33	19.2
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	33.33	19.07
Zm00001d027329_P002	Maize	nucleus	39.64	18.67
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	32.43	18.34
TraesCS3A01G067600.1	Wheat	nucleus	38.14	16.73
Bra031188.1-P	Field mustard	nucleus	25.23	14.69
TraesCS4B01G012300.2	Wheat	cytosol	10.51	11.01
Bra022208.1-P	Field mustard	plasma membrane, vacuole	28.83	10.71
Os12t0108900-00	Rice	cytosol, nucleus	9.91	9.27
HORVU4Hr1G089730.3	Barley	nucleus	9.01	8.4
TraesCS6D01G114500.1	Wheat	mitochondrion	9.91	6.92
OQU87185	Sorghum	cytosol	2.1	2.97

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	Gene3D:3.40.50.150	MapMan:50.2.1	EnsemblPlantsGene:Bra023479	EnsemblPlants:Bra023479.1
EnsemblPlants:Bra023479.1-P	InterPro:C5_MeTfrase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0006259
GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740
InterPro:IPR001525	InterPro:IPR015940	InterPro:IPR030380	UniProt:M4E3X6	PFAM:PF00145	PFscan:PS50030
PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335
InterPro:UBA	UniParc:UPI0002543576	:	:	:	:

Description

AT5G14620 (E=7e-060) DRM2, DMT7 | DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2); N-methyltransferase

Coordinates

chrA02:-:3535604..3538469

Molecular Weight (calculated)

37406.3 Da

IEP (calculated)

4.165

GRAVY (calculated)

-0.164

Length

333 amino acids

Sequence
(BLAST)

001: MFATLVDMGF SDDVIDRAIQ ENVCPCLSVF SHLLYDYVVK MNCEPSSSKS KTIDHFLAMG FDEEKIIKAI HKHGEENMEE IANALLSSEA DTLPIMKEED
101: NMDWSDSDDE MKYADLLSSD NEKDQDSFDS CNPLSSLVKM GFSELEASLA IERCGDSVSI ADLADFICAA HIAREFDEFY IDPEEQKVDT VAYHLSVLTP
201: LFPDGINVLS LFTGIGGGEV ALHRLKIPMK TVISLEISEV NRNILRDFWE QTNQRGVLIE FEDVQDLARD KIIELMKRFG GFDLVIGGSP CNNLAGGNRV
301: SRSGLEGEQS SLFFEFCRIL EVVRETTMEM RRS

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.