Factsheet for Zm00001d044187_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005789_P001
Zm00001d007084_P001
Zm00001d008249_P012
Zm00001d008338_P001
Zm00001d011236_P001
Zm00001d011705_P002
Zm00001d012423_P001
Zm00001d020580_P001
Zm00001d025913_P001
Zm00001d032070_P001
Zm00001d039214_P025
Zm00001d039821_P001
Zm00001d040279_P012
Zm00001d040429_P012
Zm00001d042930_P001
Zm00001d043682_P002
Zm00001d043683_P001
Zm00001d044247_P001
Zm00001d044917_P001
Zm00001d048491_P001
Zm00001d050047_P001
Zm00001d050100_P001
Zm00001d051591_P001
Zm00001d052871_P001
Zm00001d053451_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14620.1	Zm00001d044917_P001	AT1G49590.1	23524848
AT5G14620.1	Zm00001d011705_P002	AT2G19520.1	24855943
AT5G14620.1	Zm00001d043682_P002	AT2G19520.1	24855943
AT5G14620.1	Zm00001d043683_P001	AT2G19520.1	24855943
AT5G14620.1	Zm00001d050047_P001	AT2G19520.1	24855943
AT5G14620.1	Zm00001d052871_P001	AT2G19520.1	24855943
AT5G14620.1	Zm00001d053451_P001	AT2G19520.1	24855943
AT5G14620.1	Zm00001d008249_P012	AT2G27040.1	24855943
AT5G14620.1	Zm00001d039214_P025	AT2G27040.1	24855943
AT5G14620.1	Zm00001d040429_P012	AT2G27040.1	24855943
AT5G14620.1	Zm00001d008338_P001	AT3G16830.1	24855943
AT5G14620.1	Zm00001d040279_P012	AT3G16830.1	24855943
AT5G14620.1	Zm00001d005789_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d007084_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d011236_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d012423_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d020580_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d025913_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d032070_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d039821_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d042930_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d044247_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d048491_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d050100_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d051591_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d008249_P012	AT5G21150.1	24855943
AT5G14620.1	Zm00001d039214_P025	AT5G21150.1	24855943
AT5G14620.1	Zm00001d040429_P012	AT5G21150.1	24855943

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G017920.1	Barley	cytosol	24.08	72.84
PGSC0003DMT400040081	Potato	mitochondrion	48.57	57.77
TraesCS4B01G388300.1	Wheat	cytosol	46.12	56.78
TraesCS6A01G124200.1	Wheat	peroxisome	47.76	54.67
Os11t0109200-00	Rice	plastid	36.33	53.29
KRG93790	Soybean	cytosol	14.29	36.46
TraesCSU01G224900.1	Wheat	peroxisome	55.51	36.27
TraesCS3D01G454900.1	Wheat	peroxisome	61.22	33.26
TraesCS3B01G503900.1	Wheat	peroxisome	60.82	33.04
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	61.22	32.97
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	61.22	30.74
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	52.65	29.72
HORVU6Hr1G081790.1	Barley	nucleus	60.41	27.41
HORVU3Hr1G098970.1	Barley	nucleus	55.51	26.82
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	57.14	26.27
Bra023480.1-P	Field mustard	cytosol	46.94	25.84
TraesCS3B01G504000.1	Wheat	nucleus	55.51	25.47
Os03t0110800-01	Rice	nucleus	62.04	25.46
TraesCS5B01G239800.1	Wheat	nucleus	61.63	25.42
Zm00001d048516_P001	Maize	nucleus	62.45	25.37
CDX85589	Canola	nucleus	45.71	25.17
TraesCS5A01G241800.1	Wheat	nucleus	62.45	24.76
TraesCS5D01G248300.1	Wheat	nucleus	62.04	24.6
CDY40934	Canola	nucleus	43.27	24.48
TraesCS6B01G369700.1	Wheat	nucleus	60.41	24.46
TraesCSU01G140500.1	Wheat	nucleus	60.0	24.46
TraesCS6D01G319500.2	Wheat	nucleus	60.0	24.3
TraesCS6A01G338800.1	Wheat	nucleus	60.0	24.3
KRH69576	Soybean	nucleus	53.06	24.21
TraesCS4B01G390500.4	Wheat	nucleus	59.18	24.13
TraesCS4D01G046800.1	Wheat	nucleus	59.18	24.13
CDX69571	Canola	nucleus	54.29	23.92
TraesCS4B01G388900.2	Wheat	nucleus	58.78	23.88
TraesCS4B01G334900.1	Wheat	nucleus	58.78	23.88
TraesCSU01G124200.1	Wheat	nucleus	58.78	23.88
TraesCS5A01G553300.3	Wheat	nucleus	59.18	23.77
TraesCS4B01G047000.1	Wheat	nucleus	58.37	23.75
CDY09872	Canola	nucleus	53.88	23.74
TraesCSU01G140600.1	Wheat	nucleus	60.0	23.71
TraesCS4A01G267400.1	Wheat	nucleus	41.22	23.6
CDX85590	Canola	cytosol	53.06	23.3
KRG93258	Soybean	nucleus	55.1	23.28
TraesCS3B01G504200.1	Wheat	nucleus	57.55	23.19
Solyc02g062740.2.1	Tomato	nucleus	56.73	23.05
CDX91035	Canola	cytosol	51.84	22.88
KRH56579	Soybean	nucleus	55.1	22.88
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	53.88	22.84
Bra023479.1-P	Field mustard	cytosol	31.02	22.82
VIT_14s0066g01040.t01	Wine grape	cytosol	48.98	22.56
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	52.65	22.16
Bra008749.1-P	Field mustard	nucleus	54.29	22.13
Solyc10g078190.1.1	Tomato	nucleus	54.69	22.0
TraesCS3A01G461500.1	Wheat	nucleus	57.55	21.96
TraesCS6B01G107600.1	Wheat	nucleus	55.92	21.96
Zm00001d027329_P002	Maize	nucleus	63.27	21.92
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	52.65	21.9
PGSC0003DMT400018502	Potato	nucleus	54.29	21.84
PGSC0003DMT400004867	Potato	nucleus	53.88	21.75
Solyc04g005250.2.1	Tomato	nucleus	53.47	21.58
HORVU4Hr1G089730.3	Barley	nucleus	31.43	21.57
AT5G14620.1	Thale cress	nucleus	52.65	20.61
AT5G15380.1	Thale cress	cytoskeleton, cytosol, nucleus	52.24	20.51
TraesCS6B01G186600.1	Wheat	nucleus	47.76	20.49
GSMUA_Achr8P33680_001	Banana	cytosol	42.04	20.24
CDY40933	Canola	cytosol	51.43	19.81
TraesCS3A01G067600.1	Wheat	nucleus	57.55	18.58
GSMUA_Achr3P23940_001	Banana	nucleus	42.45	17.3
GSMUA_Achr11P...	Banana	nucleus	32.24	17.14
Os12t0108900-00	Rice	cytosol, nucleus	24.08	16.57
Bra004388.1-P	Field mustard	cytosol	51.02	15.36
OQU87185	Sorghum	cytosol	13.47	13.98
TraesCS6D01G114500.1	Wheat	mitochondrion	26.94	13.84
TraesCS6B01G152200.1	Wheat	mitochondrion	26.94	13.81
CDX95928	Canola	golgi	51.43	13.4
Zm00001d010928_P001	Maize	nucleus	33.47	12.44

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:3.40.50.150	MapMan:35.1	UniProt:A0A1D6NJ95	InterPro:C5_MeTfrase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	InterPro:IPR001525	InterPro:IPR030380
ProteinID:ONM40356.1	PFAM:PF00145	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases
InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	UniParc:UPI000844529E	EnsemblPlantsGene:Zm00001d044187	EnsemblPlants:Zm00001d044187_P001	EnsemblPlants:Zm00001d044187_T001

Description

DNA (cytosine-5)-methyltransferase DRM2

Coordinates

chr3:+:221415480..221417384

Molecular Weight (calculated)

27671.0 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.301

Length

245 amino acids

Sequence
(BLAST)

001: MGFHEDEDEM AITRCRGRFG LFWYLCEKET GKVHGTEEET REAIWGASSA LIEHILDALA NSEDPPSATV QKYVLGQCRK WNLVWVGRHR VAPLEPDEIE
101: FLLGFPKDHT RGINSTERYR SLGNSFQVHT VAYHLSVLRE MFPNGMNVLS LFSEIGGAKI ALHKLGIRMK TMVSVESITS DWLESTIKEI GGLDLVIGGS
201: PCNNFTGSNR YHRGGLEGEH SSLFYHYSRI LDCVKYSSQS VMQRV

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.