Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G388300.1 | Wheat | cytosol | 30.68 | 92.96 |
| TraesCS4B01G388900.2 | Wheat | nucleus | 89.39 | 89.39 |
| TraesCS4B01G390500.4 | Wheat | nucleus | 80.93 | 81.2 |
| TraesCS3B01G503900.1 | Wheat | peroxisome | 59.04 | 78.94 |
| TraesCS5B01G239800.1 | Wheat | nucleus | 75.29 | 76.43 |
| TraesCS6B01G369700.1 | Wheat | nucleus | 72.64 | 72.4 |
| TraesCS6B01G107600.1 | Wheat | nucleus | 74.46 | 71.96 |
| Os11t0109200-00 | Rice | plastid | 19.73 | 71.26 |
| TraesCS3B01G504000.1 | Wheat | nucleus | 59.87 | 67.6 |
| TraesCS6B01G186600.1 | Wheat | nucleus | 63.18 | 66.72 |
| Os03t0110800-01 | Rice | nucleus | 63.85 | 64.49 |
| TraesCS4B01G047000.1 | Wheat | nucleus | 61.03 | 61.13 |
| Zm00001d048516_P001 | Maize | nucleus | 60.2 | 60.2 |
| EES00541 | Sorghum | nucleus | 60.53 | 60.03 |
| OQU93413 | Sorghum | nucleus | 60.03 | 59.64 |
| Zm00001d044187_P001 | Maize | cytosol | 23.88 | 58.78 |
| EER95283 | Sorghum | nucleus | 55.56 | 58.16 |
| TraesCS3B01G504200.1 | Wheat | nucleus | 57.71 | 57.24 |
| OQU87185 | Sorghum | cytosol | 21.23 | 54.24 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 31.51 | 53.37 |
| Zm00001d027329_P002 | Maize | nucleus | 61.19 | 52.19 |
| TraesCS6B01G152200.1 | Wheat | mitochondrion | 35.49 | 44.77 |
| TraesCS4B01G012300.2 | Wheat | cytosol | 23.22 | 44.03 |
| TraesCS5B01G057300.1 | Wheat | cytosol | 24.88 | 23.18 |
Protein Annotations
| KEGG:00270+2.1.1.37 | MapMan:12.5.1.11 | Gene3D:3.40.50.150 | InterPro:C5_MeTfrase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR001525 | InterPro:IPR030380 | PFAM:PF00145 | PFscan:PS51680 |
| PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS4B01G334900 |
| EnsemblPlants:TraesCS4B01G334900.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:625971689..625976846
Molecular Weight (calculated)
67034.1 Da
IEP (calculated)
6.139
GRAVY (calculated)
-0.477
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGWTSDSGD SDKFECDSDG EAGPSSAPAM RNFDAPGPST LGSNGWINGE VPPTSLIERY VVMGFPKEMV TKSIKEIGHG DADALLELLL TYKALDDDDA
101: VGNNHSTSGC ILPVVENDDD LDFENWDGDD DAGGRESSSD DSGYEDFMRE MSERDEKINS LVNMFFSEDE ANRAIIRCGA DVDIFVLVDS IGASQVAEDC
201: HSRNLSDNQV TDRCFNSFGG RKKAILMEES RKKRKRYRGG GQGNRPSLDG SDEESTPLPN PMVGFNLPGY RGPSVTRMLS KLDTGPPFFY YENVARAPKG
301: EWAKISRNLF DIQPEFVDSL HLCAAARKRG YIHNLPIENR SPLLPLPPKT IFEAFPHYKK WWPSWDTRTH LNCLQTCVAS AKLTERIQRA LVSSSNPPPK
401: SVQKYVMDEC KKWNLVWVGK NKVAPLEPHE MELLLGFPKD HTRGVGKTQR YKSLGNSFQV DTVAYHLSVL RRMFPNGVRV LSLFTSIGGG EVALHKLGIH
501: MRVVVSVEIG EANRRILRGW WDQTQTGALI EIPDVKSLTD ERVASFVSRF GGFDLVIGGS PCNNLAGSNR HHRDGLEGKH SALFYDYVRI LNFVNSAMGG
601: RRL
101: VGNNHSTSGC ILPVVENDDD LDFENWDGDD DAGGRESSSD DSGYEDFMRE MSERDEKINS LVNMFFSEDE ANRAIIRCGA DVDIFVLVDS IGASQVAEDC
201: HSRNLSDNQV TDRCFNSFGG RKKAILMEES RKKRKRYRGG GQGNRPSLDG SDEESTPLPN PMVGFNLPGY RGPSVTRMLS KLDTGPPFFY YENVARAPKG
301: EWAKISRNLF DIQPEFVDSL HLCAAARKRG YIHNLPIENR SPLLPLPPKT IFEAFPHYKK WWPSWDTRTH LNCLQTCVAS AKLTERIQRA LVSSSNPPPK
401: SVQKYVMDEC KKWNLVWVGK NKVAPLEPHE MELLLGFPKD HTRGVGKTQR YKSLGNSFQV DTVAYHLSVL RRMFPNGVRV LSLFTSIGGG EVALHKLGIH
501: MRVVVSVEIG EANRRILRGW WDQTQTGALI EIPDVKSLTD ERVASFVSRF GGFDLVIGGS PCNNLAGSNR HHRDGLEGKH SALFYDYVRI LNFVNSAMGG
601: RRL
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.