Factsheet for Os03t0110800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0149600-01
Os01t0152300-00
Os01t0152900-00
Os01t0153100-00
Os01t0153300-00
Os01t0254100-01
Os01t0275200-00
Os01t0275600-01
Os01t0710000-01
Os01t0839500-00
Os03t0279000-00
Os04t0151800-02
Os05t0460475-00
Os05t0574300-00
Os06t0215200-01
Os08t0490900-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14620.1	Os06t0215200-01	AT1G49590.1	23524848
AT5G14620.1	Os01t0710000-01	AT2G19520.1	24855943
AT5G14620.1	Os01t0275200-00	AT2G27040.1	24855943
AT5G14620.1	Os01t0275600-01	AT2G27040.1	24855943
AT5G14620.1	Os04t0151800-02	AT2G27040.1	24855943
AT5G14620.1	Os01t0254100-01	AT3G16830.1	24855943
AT5G14620.1	Os01t0149600-01	AT3G45980.1	24855943
AT5G14620.1	Os01t0152300-00	AT3G45980.1	24855943
AT5G14620.1	Os01t0152900-00	AT3G45980.1	24855943
AT5G14620.1	Os01t0153100-00	AT3G45980.1	24855943
AT5G14620.1	Os01t0153300-00	AT3G45980.1	24855943
AT5G14620.1	Os01t0839500-00	AT3G45980.1	24855943
AT5G14620.1	Os03t0279000-00	AT3G45980.1	24855943
AT5G14620.1	Os05t0460475-00	AT3G45980.1	24855943
AT5G14620.1	Os05t0574300-00	AT3G45980.1	24855943
AT5G14620.1	Os08t0490900-00	AT3G45980.1	24855943
AT5G14620.1	Os01t0275200-00	AT5G21150.1	24855943
AT5G14620.1	Os01t0275600-01	AT5G21150.1	24855943
AT5G14620.1	Os04t0151800-02	AT5G21150.1	24855943

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0109200-00	Rice	plastid	23.79	85.03
HORVU4Hr1G017920.1	Barley	cytosol	10.22	75.31
TraesCS4B01G388300.1	Wheat	cytosol	24.12	72.36
PGSC0003DMT400040081	Potato	mitochondrion	24.62	71.36
TraesCSU01G224900.1	Wheat	peroxisome	44.39	70.67
TraesCS5B01G239800.1	Wheat	nucleus	69.68	70.03
Os12t0108900-00	Rice	cytosol, nucleus	41.71	69.94
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	52.93	69.45
TraesCS6A01G124200.1	Wheat	peroxisome	24.79	69.16
TraesCS3B01G503900.1	Wheat	peroxisome	51.76	68.51
Zm00001d048516_P001	Maize	nucleus	69.18	68.49
TraesCS3D01G454900.1	Wheat	peroxisome	51.59	68.29
TraesCS5D01G248300.1	Wheat	nucleus	70.69	68.28
TraesCS5A01G241800.1	Wheat	nucleus	70.18	67.8
EES00541	Sorghum	nucleus	68.17	66.94
HORVU6Hr1G081790.1	Barley	nucleus	60.13	66.48
OQU93413	Sorghum	nucleus	67.5	66.39
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	54.1	66.19
TraesCS6B01G369700.1	Wheat	nucleus	65.66	64.79
TraesCS6A01G338800.1	Wheat	nucleus	65.16	64.3
TraesCS4B01G334900.1	Wheat	nucleus	64.49	63.85
TraesCS4B01G388900.2	Wheat	nucleus	64.49	63.85
EER95283	Sorghum	nucleus	61.47	63.72
TraesCSU01G124200.1	Wheat	nucleus	64.32	63.68
TraesCS6D01G319500.2	Wheat	nucleus	64.49	63.64
TraesCS4B01G390500.4	Wheat	nucleus	63.65	63.23
TraesCS5A01G553300.3	Wheat	nucleus	64.49	63.11
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	45.56	62.67
TraesCSU01G140500.1	Wheat	nucleus	62.65	62.23
TraesCS4D01G046800.1	Wheat	nucleus	62.48	62.06
Zm00001d044187_P001	Maize	cytosol	25.46	62.04
TraesCS4B01G047000.1	Wheat	nucleus	61.98	61.46
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	59.46	61.42
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	59.3	60.82
TraesCSU01G140600.1	Wheat	nucleus	62.98	60.65
TraesCS4A01G267400.1	Wheat	nucleus	43.38	60.51
TraesCS6B01G186600.1	Wheat	nucleus	57.12	59.72
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	52.93	59.29
TraesCS3B01G504000.1	Wheat	nucleus	52.6	58.8
Zm00001d027329_P002	Maize	nucleus	68.84	58.13
HORVU4Hr1G089730.3	Barley	nucleus	34.67	57.98
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	56.95	57.73
HORVU3Hr1G098970.1	Barley	nucleus	48.58	57.2
TraesCS6B01G107600.1	Wheat	nucleus	58.96	56.41
OQU87185	Sorghum	cytosol	21.61	54.66
VIT_14s0066g01040.t01	Wine grape	cytosol	46.4	52.07
TraesCS3A01G461500.1	Wheat	nucleus	55.61	51.71
KRH69576	Soybean	nucleus	46.06	51.21
KRG93258	Soybean	nucleus	49.41	50.86
CDY09872	Canola	nucleus	47.24	50.72
CDX69571	Canola	nucleus	47.07	50.54
TraesCS3B01G504200.1	Wheat	nucleus	50.92	50.0
KRH56579	Soybean	nucleus	49.25	49.83
Solyc02g062740.2.1	Tomato	nucleus	50.25	49.75
GSMUA_Achr8P33680_001	Banana	cytosol	42.38	49.71
PGSC0003DMT400004867	Potato	nucleus	50.08	49.26
Solyc10g078190.1.1	Tomato	nucleus	49.41	48.44
PGSC0003DMT400018502	Potato	nucleus	49.25	48.28
Solyc04g005250.2.1	Tomato	nucleus	49.08	48.27
CDY40934	Canola	nucleus	34.84	48.04
Bra008749.1-P	Field mustard	nucleus	47.74	47.42
CDX85590	Canola	cytosol	44.22	47.31
Bra023480.1-P	Field mustard	cytosol	35.01	46.97
CDX85589	Canola	nucleus	35.01	46.97
KRG93790	Soybean	cytosol	7.54	46.88
CDX91035	Canola	cytosol	43.05	46.31
GSMUA_Achr3P23940_001	Banana	nucleus	46.57	46.26
GSMUA_Achr11P...	Banana	nucleus	35.34	45.77
AT5G14620.1	Thale cress	nucleus	47.74	45.53
TraesCS3A01G067600.1	Wheat	nucleus	56.28	44.27
AT5G15380.1	Thale cress	cytoskeleton, cytosol, nucleus	45.73	43.75
TraesCS6B01G152200.1	Wheat	mitochondrion	35.01	43.72
TraesCS6D01G114500.1	Wheat	mitochondrion	34.67	43.4
Bra023479.1-P	Field mustard	cytosol	23.45	42.04
CDY40933	Canola	cytosol	44.39	41.67
Bra004388.1-P	Field mustard	cytosol	43.55	31.94
CDX95928	Canola	golgi	44.72	28.4
Os05t0133900-02	Rice	nucleus	28.64	25.15

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	ProteinID:BAS81924.1	InterPro:C5_MeTfrase
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0003886	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987
GO:GO:0016740	GO:GO:0032259	GO:GO:0090116	InterPro:IPR001525	InterPro:IPR030380	EnsemblPlantsGene:Os03g0110800
EnsemblPlants:Os03t0110800-01	PFAM:PF00145	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases
InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	UniParc:UPI0000DB482C	SEG:seg	:	:

Description

DOMAINS REARRANGED METHYLTRANSFERASE 2DNA methyltransferase, Vegetative and reproductive development (Os03t0110800-01)

Coordinates

chr3:+:632664..636333

Molecular Weight (calculated)

66734.4 Da

IEP (calculated)

4.932

GRAVY (calculated)

-0.506

Length

597 amino acids

Sequence
(BLAST)

001: MVDWASDSDN DKFEWDTDGE AETSSAPALR NIDAPGPSTR LPQDANGKAN GSGALVAEFM GMGFPKEMIL KAIKEIGDTD TEQLLELLLT YQAIGGDASV
101: GNCSASACAP QTLEVDEEED DTNWDEYDTA GNCDRTPHSD GSGDEDFFQE MSEKDEKMKS LVNMGFPEDE AKMAIDRCLD APVAVLVDSI YASQEAGNGY
201: SANLSDYEDT EFSSFGGRKK TRFVDGSKKR KRYGSGPSGN QVPFDGSHEE PMPLPNPMVG FSLPNERLRS VHRNLPDQAL GPPFFYYENV ALAPKGVWTT
301: ISRFLYDIQP EFVDSKYFCA AARKRGYIHN LPIENRSPVL PMPPKTISEA FPNTKRWWPS WDPRRQFNCL QTCMASAKLT ERIRCALGRF SDVPTPQVQK
401: YVLDECRKWN LVWVGKNKVA PLEPDEMEFL LGYPRNHTRG VSRTERYRAL GNSFQVDTVA YHLSVLRDLF PNGMNVLSLF SGIGGAEVAL HRLGIHMKTV
501: ISVEKSEVNR TILKSWWDQT QTGTLIEIAD VRHLTTERIE TFIRRFGGFD LVIGGSPCNN LAGSNRHHRD GLEGEHSALF YDYIRILEHV KATMSAV

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.