Factsheet for TraesCS3B01G503900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G224900.1	Wheat	peroxisome	82.93	99.73
TraesCS3D01G454900.1	Wheat	peroxisome	97.78	97.78
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	90.69	89.89
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	95.12	87.91
TraesCS4B01G388300.1	Wheat	cytosol	34.81	78.89
Os11t0109200-00	Rice	plastid	25.5	68.86
TraesCS3B01G504000.1	Wheat	nucleus	72.95	61.61
Zm00001d044187_P001	Maize	cytosol	33.04	60.82
TraesCS5B01G239800.1	Wheat	nucleus	78.94	59.93
TraesCS4B01G334900.1	Wheat	nucleus	78.94	59.04
TraesCS4B01G388900.2	Wheat	nucleus	78.71	58.87
TraesCS4B01G390500.4	Wheat	nucleus	78.05	58.57
TraesCS6B01G369700.1	Wheat	nucleus	76.94	57.36
TraesCS3B01G504200.1	Wheat	nucleus	73.39	54.44
TraesCS6B01G107600.1	Wheat	nucleus	71.62	51.76
Os03t0110800-01	Rice	nucleus	68.51	51.76
OQU87185	Sorghum	cytosol	27.05	51.69
EER95283	Sorghum	nucleus	64.75	50.69
Os12t0108900-00	Rice	cytosol, nucleus	39.91	50.56
TraesCS6B01G186600.1	Wheat	nucleus	63.19	49.91
Zm00001d048516_P001	Maize	nucleus	66.08	49.42
EES00541	Sorghum	nucleus	65.19	48.36
TraesCS4B01G047000.1	Wheat	nucleus	63.64	47.67
OQU93413	Sorghum	nucleus	63.64	47.28
Zm00001d027329_P002	Maize	nucleus	66.96	42.72
TraesCS6B01G152200.1	Wheat	mitochondrion	42.13	39.75
TraesCS4B01G012300.2	Wheat	cytosol	26.16	37.11
TraesCS5B01G057300.1	Wheat	cytosol	30.6	21.33

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR015940	InterPro:IPR030380
PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases
InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS3B01G503900	EnsemblPlants:TraesCS3B01G503900.1	InterPro:UBA	:

Description

No Description!

Coordinates

chr3B:+:747835241..747836760

Molecular Weight (calculated)

50570.6 Da

IEP (calculated)

8.613

GRAVY (calculated)

-0.396

Length

451 amino acids

Sequence
(BLAST)

001: MSEKDEKIKS LVDMGFSEDG ANMAITRCGV DVDLWELVDS ISAPQMTEDS HSRNISDHQV TDQCFDSFGG GKKARLMEES KKKRNRYGGR AQGNQPSLDG
101: SHDEPMPLPN PMIGFNLPGY LQPSVTRILP KQDTGPPFFY YENVAQAPKG VWATISRFLY DIQPEFVDSK HLCATARKRG YIHNLPIENR SPLLPMPPKT
201: IFEAFPHYKK WWPSWDLRTQ LNCLRTNIAS AKLTERIGRA LASSDSPPAR SVQKYVMNEC RKGNLVWIGK NKVAPLEPEE MEYLLGFPKD HTRGLGITER
301: YKSLGNTFQV DTVAYHLSVL KVMFPNGVNV LSLFTGIGGG EVALHRLGIH MKAVVSVEIG KANKRIFRGW WDQTQTGTLI EIDDVKSLTD DTIVSFVSRF
401: GGFDLVIGGS PCNNLAGCNR YNRDGLEGEQ SALFYHYFRI LNAVKSAMAR I

Best Arabidopsis Sequence Match ( AT3G17310.1 )
(BLAST)

001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM

Arabidopsis Description

DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.