Factsheet for TraesCS6B01G107600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G390500.4	Wheat	nucleus	79.81	82.86
TraesCSU01G140500.1	Wheat	nucleus	79.65	82.7
TraesCSU01G140600.1	Wheat	nucleus	79.65	80.16
TraesCS4B01G388300.1	Wheat	cytosol	25.48	79.9
TraesCS4B01G334900.1	Wheat	nucleus	71.96	74.46
TraesCS4B01G388900.2	Wheat	nucleus	71.31	73.8
TraesCS3B01G503900.1	Wheat	peroxisome	51.76	71.62
TraesCS5B01G239800.1	Wheat	nucleus	67.15	70.54
TraesCS6B01G369700.1	Wheat	nucleus	66.99	69.09
HORVU4Hr1G089730.3	Barley	nucleus	39.1	68.35
Os11t0109200-00	Rice	plastid	17.31	64.67
TraesCS3B01G504000.1	Wheat	nucleus	52.72	61.61
TraesCS6B01G186600.1	Wheat	nucleus	54.01	59.02
Os03t0110800-01	Rice	nucleus	56.41	58.96
TraesCS4B01G047000.1	Wheat	nucleus	54.97	56.98
Zm00001d048516_P001	Maize	nucleus	54.17	56.05
Zm00001d044187_P001	Maize	cytosol	21.96	55.92
OQU93413	Sorghum	nucleus	53.85	55.35
EER95283	Sorghum	nucleus	50.64	54.86
EES00541	Sorghum	nucleus	53.37	54.77
TraesCS3B01G504200.1	Wheat	nucleus	52.88	54.28
OQU87185	Sorghum	cytosol	19.39	51.27
Os12t0108900-00	Rice	cytosol, nucleus	28.37	49.72
Zm00001d027329_P002	Maize	nucleus	55.45	48.94
TraesCS6B01G152200.1	Wheat	mitochondrion	32.21	42.05
TraesCS4B01G012300.2	Wheat	cytosol	21.31	41.82
TraesCS5B01G057300.1	Wheat	cytosol	22.76	21.95

Protein Annotations

KEGG:00270+2.1.1.37	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR030380	PFAM:PF00145
PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335
EnsemblPlantsGene:TraesCS6B01G107600	EnsemblPlants:TraesCS6B01G107600.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:-:88217704..88221035

Molecular Weight (calculated)

69926.6 Da

IEP (calculated)

4.943

GRAVY (calculated)

-0.559

Length

624 amino acids

Sequence
(BLAST)

001: MSQDWTSDSD DGDKFEWDSD SDDSDKFEWD SDSDDSDKFE WDSDGEAEPS SAPAMRNFDA PGPSTSLDGW INGEAPPTSL IEGYVAMGFP KEMVVTSIKE
101: IGHSDADALL ELLLMYKALG DDYAVDNHSN FGCSPPSVED DDGLDFQNWD GDDDTGGKES SSDDSGYEDF LREMSDKDEK INSLRGMGFS EDETNMAITI
201: CGVDADLSIL VDSISASHVI EVCHSRNLSD HQRKRARLIE ESKKKRKRYG GGAQGKRPSS DGSDEESMPL PNPMVGFNFP GYRGPSMTQV LLELATGPPY
301: FYYENVARAP KGVWAKITRF LFDIQPEFVH SLHLCEAARK RGYIQNLPTE NRSPLPPLPP KTIFEAFPDY KMWWPSWDQR THLSCLQTCM ASAKVTERIQ
401: RALSSSGNPP PQSVQKYVRH ECSKWNLVWV GKNKVAPLEP HEMEYLLGFP RDHTRGVGKT QRYKSLGNSF HVDKVAYHLS VSRVMFPNGV TVLSLFTGIV
501: GGEVALHKLG IHMRVVVSVE ICKANREILR SWWDQTQTCT LIEIADVKFL KDDEIASYVS RFGGFYLVIR GSPCNNLAGS NQHHRDGLEG KHSSSFFDYF
601: RILNSVKSAM ATMQPNRCST YAIH

Best Arabidopsis Sequence Match ( AT3G17310.1 )
(BLAST)

001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM

Arabidopsis Description

DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.