Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G140500.1 | Wheat | nucleus | 96.13 | 99.17 |
| TraesCS4B01G390500.4 | Wheat | nucleus | 90.16 | 93.01 |
| TraesCSU01G124200.1 | Wheat | nucleus | 78.39 | 80.6 |
| TraesCS6B01G107600.1 | Wheat | nucleus | 80.16 | 79.65 |
| TraesCSU01G224900.1 | Wheat | peroxisome | 47.1 | 77.87 |
| HORVU4Hr1G089730.3 | Barley | nucleus | 42.74 | 74.23 |
| Os11t0109200-00 | Rice | plastid | 18.71 | 69.46 |
| PGSC0003DMT400040081 | Potato | mitochondrion | 21.77 | 65.53 |
| Os03t0110800-01 | Rice | nucleus | 60.65 | 62.98 |
| Zm00001d048516_P001 | Maize | nucleus | 59.19 | 60.86 |
| OQU93413 | Sorghum | nucleus | 58.87 | 60.13 |
| Zm00001d044187_P001 | Maize | cytosol | 23.71 | 60.0 |
| EES00541 | Sorghum | nucleus | 58.71 | 59.87 |
| EER95283 | Sorghum | nucleus | 54.52 | 58.68 |
| OQU87185 | Sorghum | cytosol | 20.97 | 55.08 |
| Zm00001d027329_P002 | Maize | nucleus | 60.97 | 53.47 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 29.68 | 51.69 |
| VIT_14s0066g01040.t01 | Wine grape | cytosol | 41.61 | 48.5 |
| KRG93258 | Soybean | nucleus | 45.0 | 48.1 |
| KRH69576 | Soybean | nucleus | 41.13 | 47.49 |
| KRH56579 | Soybean | nucleus | 44.84 | 47.12 |
| CDY40934 | Canola | nucleus | 32.9 | 47.11 |
| Bra023480.1-P | Field mustard | cytosol | 33.55 | 46.74 |
| CDX85589 | Canola | nucleus | 33.23 | 46.29 |
| CDX69571 | Canola | nucleus | 41.45 | 46.22 |
| Solyc02g062740.2.1 | Tomato | nucleus | 44.52 | 45.77 |
| CDY09872 | Canola | nucleus | 40.97 | 45.68 |
| Solyc10g078190.1.1 | Tomato | nucleus | 43.55 | 44.34 |
| PGSC0003DMT400004867 | Potato | nucleus | 43.06 | 43.99 |
| PGSC0003DMT400018502 | Potato | nucleus | 43.06 | 43.84 |
| KRG93790 | Soybean | cytosol | 6.77 | 43.75 |
| CDX91035 | Canola | cytosol | 39.03 | 43.6 |
| CDX85590 | Canola | cytosol | 39.19 | 43.55 |
| GSMUA_Achr8P33680_001 | Banana | cytosol | 35.65 | 43.42 |
| Bra008749.1-P | Field mustard | nucleus | 41.94 | 43.26 |
| GSMUA_Achr3P23940_001 | Banana | nucleus | 41.45 | 42.76 |
| Solyc04g005250.2.1 | Tomato | nucleus | 41.61 | 42.5 |
| GSMUA_Achr11P... | Banana | nucleus | 31.45 | 42.3 |
| AT5G15380.1 | Thale cress | cytoskeleton, cytosol, nucleus | 42.42 | 42.15 |
| AT5G14620.1 | Thale cress | nucleus | 42.26 | 41.85 |
| CDY40933 | Canola | cytosol | 40.97 | 39.94 |
| Bra023479.1-P | Field mustard | cytosol | 20.48 | 38.14 |
| Bra004388.1-P | Field mustard | cytosol | 40.81 | 31.08 |
| CDX95928 | Canola | golgi | 41.61 | 27.45 |
Protein Annotations
| KEGG:00270+2.1.1.37 | MapMan:12.5.1.11 | Gene3D:3.40.50.150 | InterPro:C5_MeTfrase | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR001525 | InterPro:IPR030380 | PFAM:PF00145 |
| PFscan:PS51680 | PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF53335 |
| EnsemblPlantsGene:TraesCSU01G140600 | EnsemblPlants:TraesCSU01G140600.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrUn:+:134264914..134269711
Molecular Weight (calculated)
68917.7 Da
IEP (calculated)
5.507
GRAVY (calculated)
-0.572
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQNLERAIP LRSVRTKNSS KDWTSDSDGS DKFEWDSDGE AEASSAPAMR NFDAPGPSTL SSNGWINGEP PPTSLIEGYV AMGFPKEMVV RSSKEIGHGD
101: ADALLELLLT YKALGDDDDA LGNHSTSGCN LPIVEDDDDL DFENWDGDDD TGGRESSSDD SGYEEFLREM SDKDEKINSL RDMGFSEDEA NMAITICGVD
201: ADLSVLVDSI SASQVTEVCH SRNLSDHQVT ARCFDSFGGK KRARLIEESK KKRKRYGGGA QGKRPSSDGS DEESMPLPNP MVGFNLPGYR GPSMTRVLPE
301: LATGPPYFYY ENVARAPKGV WAKITRFLFD IQPEFVDSLH LCAAARKRGY IHNLPTENRS PLLPLPPKTI FEAFPHDKKW WPSWDQRTHF NCLQTCTASA
401: PVTERIQQKL SSSGNPPPQS VQKYVRHQCS KWNLVWVGKD KAAPLEPHEM EYLLGFPKDH TRGFGKTQRY KSLGNSFQVD TVAYHLSVLR DMFPNGITVL
501: SLFTGIGGGE VALHKLGIHM RAVVSIEICK ANRKILRSWW DQTQTGTLIE IDDVKSLKDD EIASYVHRFG GFDLVIGGSP CNNLAGSNRH HRDGLEGEHS
601: SLFYDYFRIL NSVKSAMANM
101: ADALLELLLT YKALGDDDDA LGNHSTSGCN LPIVEDDDDL DFENWDGDDD TGGRESSSDD SGYEEFLREM SDKDEKINSL RDMGFSEDEA NMAITICGVD
201: ADLSVLVDSI SASQVTEVCH SRNLSDHQVT ARCFDSFGGK KRARLIEESK KKRKRYGGGA QGKRPSSDGS DEESMPLPNP MVGFNLPGYR GPSMTRVLPE
301: LATGPPYFYY ENVARAPKGV WAKITRFLFD IQPEFVDSLH LCAAARKRGY IHNLPTENRS PLLPLPPKTI FEAFPHDKKW WPSWDQRTHF NCLQTCTASA
401: PVTERIQQKL SSSGNPPPQS VQKYVRHQCS KWNLVWVGKD KAAPLEPHEM EYLLGFPKDH TRGFGKTQRY KSLGNSFQVD TVAYHLSVLR DMFPNGITVL
501: SLFTGIGGGE VALHKLGIHM RAVVSIEICK ANRKILRSWW DQTQTGTLIE IDDVKSLKDD EIASYVHRFG GFDLVIGGSP CNNLAGSNRH HRDGLEGEHS
601: SLFYDYFRIL NSVKSAMANM
001: MVMSHIFLIS QIQEVEHGDS DDVNWNTDDD ELAIDNFQFS PSPVHISATS PNSIQNRISD ETVASFVEMG FSTQMIARAI EETAGANMEP MMILETLFNY
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR
Arabidopsis Description
DRM1DNA (cytosine-5)-methyltransferase DRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE5]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.