Factsheet for TraesCS4B01G390500.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G140500.1	Wheat	nucleus	93.84	93.84
TraesCSU01G140600.1	Wheat	nucleus	93.01	90.16
TraesCS4B01G388300.1	Wheat	cytosol	27.79	83.92
TraesCS4B01G334900.1	Wheat	nucleus	81.2	80.93
TraesCS4B01G388900.2	Wheat	nucleus	80.87	80.6
TraesCS6B01G107600.1	Wheat	nucleus	82.86	79.81
TraesCS5B01G239800.1	Wheat	nucleus	77.2	78.11
TraesCS3B01G503900.1	Wheat	peroxisome	58.57	78.05
HORVU4Hr1G089730.3	Barley	nucleus	44.43	74.79
TraesCS6B01G369700.1	Wheat	nucleus	74.21	73.72
Os11t0109200-00	Rice	plastid	19.8	71.26
TraesCS3B01G504000.1	Wheat	nucleus	59.57	67.04
TraesCS6B01G186600.1	Wheat	nucleus	62.4	65.67
Os03t0110800-01	Rice	nucleus	63.23	63.65
TraesCS4B01G047000.1	Wheat	nucleus	61.4	61.3
Zm00001d048516_P001	Maize	nucleus	61.06	60.86
OQU93413	Sorghum	nucleus	60.9	60.3
EES00541	Sorghum	nucleus	60.73	60.03
EER95283	Sorghum	nucleus	57.07	59.55
Zm00001d044187_P001	Maize	cytosol	24.13	59.18
TraesCS3B01G504200.1	Wheat	nucleus	58.07	57.4
OQU87185	Sorghum	cytosol	20.97	53.39
Zm00001d027329_P002	Maize	nucleus	62.73	53.32
Os12t0108900-00	Rice	cytosol, nucleus	30.62	51.69
TraesCS4B01G012300.2	Wheat	cytosol	23.13	43.71
TraesCS6B01G152200.1	Wheat	mitochondrion	34.28	43.1
TraesCS5B01G057300.1	Wheat	cytosol	25.62	23.8

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR030380
PFAM:PF00145	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM
SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS4B01G390500	EnsemblPlants:TraesCS4B01G390500.4	SEG:seg	:	:

Description

No Description!

Coordinates

chr4B:-:666581313..666586264

Molecular Weight (calculated)

66781.4 Da

IEP (calculated)

5.507

GRAVY (calculated)

-0.527

Length

601 amino acids

Sequence
(BLAST)

001: MADWTSGSDD SDKFDWDSDG EAEPSSAPAT RNFDAPGPST LSSNGWINGE APPTSLIEGY VAMGFPKEMV VRSIKEIGHS DAEALLELLL TYKALGDDDD
101: AVGNHSTSGC NPPIVEDNDD LDFENWNDDD DTGGRVSSSD DSGYEEFLRE MSDKDEKINS LRDMGFSEDE ANMAITICGV DADLSVLVDS ISASQVTEVC
201: HSRNLSDHQV TARCFDSFGG RKRARLIEES KKKRKRYGGG AQGKRPSLDG SDEESMPLPK PMVGFNLPGY RGPSMTRVLP ELATGPPYFY YENVARAPKG
301: VWAKITRFLF DIQPEFVDSL HLCAAARKRG YIHNLPTENR SPLLPLPPKT IFEAFPHYKK WWPSWDQRTH LNCLQTCMAP ATVTERIQQK LSSSGNPPPQ
401: SVQKYVRHEC SKWNLVWVGK DKAAPLEPHE MEYLLGFPKD HKRGVGKTQR YKSLGNSFQV DTVAYHLSVL RGMFPNGVRV LSLFTGIGGG EVALHKLGIH
501: MRVVVSVEIG EANRQILRSW WDQTQTGTLI EIADVKSLKD DEIATYVRRF GGFDLVIGGS PCNNLAGSNR HHRDGLEGEH SSLFYDYFRI LNSVKSAMAN
601: M

Best Arabidopsis Sequence Match ( AT5G15380.1 )
(BLAST)

001: MVMSHIFLIS QIQEVEHGDS DDVNWNTDDD ELAIDNFQFS PSPVHISATS PNSIQNRISD ETVASFVEMG FSTQMIARAI EETAGANMEP MMILETLFNY
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR

Arabidopsis Description

DRM1DNA (cytosine-5)-methyltransferase DRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.