Factsheet for TraesCS6B01G369700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, peroxisome
MultiLoc:	nucleus
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G319500.2	Wheat	nucleus	97.02	97.02
TraesCS6A01G338800.1	Wheat	nucleus	96.53	96.53
HORVU6Hr1G081790.1	Barley	nucleus	77.02	86.3
TraesCS4B01G388300.1	Wheat	cytosol	26.94	81.91
TraesCS3B01G503900.1	Wheat	peroxisome	57.36	76.94
TraesCS5B01G239800.1	Wheat	nucleus	75.04	76.43
TraesCS4B01G390500.4	Wheat	nucleus	73.72	74.21
TraesCS4B01G334900.1	Wheat	nucleus	72.4	72.64
TraesCS4B01G388900.2	Wheat	nucleus	72.23	72.47
Os11t0109200-00	Rice	plastid	20.0	72.46
TraesCS3B01G504000.1	Wheat	nucleus	60.66	68.73
TraesCS6B01G107600.1	Wheat	nucleus	69.09	66.99
TraesCS6B01G186600.1	Wheat	nucleus	62.64	66.37
Os03t0110800-01	Rice	nucleus	64.79	65.66
EER95283	Sorghum	nucleus	58.68	61.63
Zm00001d044187_P001	Maize	cytosol	24.46	60.41
Zm00001d048516_P001	Maize	nucleus	60.17	60.36
TraesCS3B01G504200.1	Wheat	nucleus	60.5	60.2
EES00541	Sorghum	nucleus	60.5	60.2
OQU93413	Sorghum	nucleus	59.34	59.14
TraesCS4B01G047000.1	Wheat	nucleus	58.68	58.97
OQU87185	Sorghum	cytosol	21.16	54.24
Os12t0108900-00	Rice	cytosol, nucleus	31.07	52.81
Zm00001d027329_P002	Maize	nucleus	61.65	52.76
TraesCS6B01G152200.1	Wheat	mitochondrion	37.19	47.07
TraesCS4B01G012300.2	Wheat	cytosol	21.82	41.51
TraesCS5B01G057300.1	Wheat	cytosol	25.12	23.49

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525
InterPro:IPR015940	InterPro:IPR030380	PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068
PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF46934	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS6B01G369700
EnsemblPlants:TraesCS6B01G369700.1	InterPro:UBA	InterPro:UBA-like_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:+:643260041..643265710

Molecular Weight (calculated)

67361.3 Da

IEP (calculated)

5.031

GRAVY (calculated)

-0.482

Length

605 amino acids

Sequence
(BLAST)

001: MAGLTSDSDD SDKFEWESDG EAAPSSAPAL RNLDAPGPST LERQSSNGWA NGEATSTSLV EEYVTMGFPK EMVVKGIKEI GHDDANALLE LLLTYKVLGD
101: EGALGNCSTS GCACPNVQDD DDDDLDFDNW DNDNDTGGRE HNSDSSGDED FLQEMSAKDE KINLLVGMGF SEDEANMAMT TCGVDADLCV LVDSISASRV
201: AGDCHSRNLF DDQVMDRCFD SFGERKKARL MEERKKKRKR YGGGAHGNRS SLDGSDDEQM LLPNPMVGFN LPGYRRPSVM RMLPQQAIGP PFFYYENVAR
301: TPRGVWETIS RFLYDIEPEF VDSMHLSAAA RKRGYIHNLP IENRSPLLPL PPKTIFEAFP HYKKWWPSWD PRRQFNCLQT TMASAKTTER IQCLLARSSN
401: PPPPSVQKYV IDECRKWNLV WVGKNKVAPL EPNEVEYLLG FPRDHTRGVG KTERYKSLGN SFHVDTVAYH LSVLRDMFPN GVSVLSLFTG IGGGEVALHR
501: LGIHMRAVVS VEIGEANRRI LRGWWDQTQT GTLIEIADVK SLTPDIIASY VGRFGGFDLV IGGSPCNNLA GSNRHHRDGL EGEQSSLFYH YFRILDVVKS
601: AMARM

Best Arabidopsis Sequence Match ( AT3G17310.1 )
(BLAST)

001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM

Arabidopsis Description

DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.