Factsheet for TraesCS5B01G239800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, peroxisome
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G241800.1	Wheat	nucleus	97.98	94.17
TraesCS5D01G248300.1	Wheat	nucleus	97.31	93.53
TraesCS4B01G388300.1	Wheat	cytosol	27.27	81.41
TraesCS3B01G503900.1	Wheat	peroxisome	59.93	78.94
TraesCS4B01G390500.4	Wheat	nucleus	78.11	77.2
Os11t0109200-00	Rice	plastid	21.55	76.65
TraesCS4B01G334900.1	Wheat	nucleus	76.43	75.29
TraesCS4B01G388900.2	Wheat	nucleus	76.26	75.12
TraesCS6B01G369700.1	Wheat	nucleus	76.43	75.04
TraesCS6B01G186600.1	Wheat	nucleus	67.17	69.88
Os03t0110800-01	Rice	nucleus	70.03	69.68
TraesCS3B01G504000.1	Wheat	nucleus	61.28	68.16
TraesCS6B01G107600.1	Wheat	nucleus	70.54	67.15
Zm00001d048516_P001	Maize	nucleus	66.5	65.51
EES00541	Sorghum	nucleus	65.99	64.47
OQU93413	Sorghum	nucleus	65.82	64.42
EER95283	Sorghum	nucleus	62.12	64.06
TraesCS4B01G047000.1	Wheat	nucleus	63.97	63.12
Zm00001d044187_P001	Maize	cytosol	25.42	61.63
Os12t0108900-00	Rice	cytosol, nucleus	35.02	58.43
Zm00001d027329_P002	Maize	nucleus	68.35	57.43
TraesCS3B01G504200.1	Wheat	nucleus	58.75	57.4
OQU87185	Sorghum	cytosol	22.39	56.36
TraesCS6B01G152200.1	Wheat	mitochondrion	39.23	48.74
TraesCS4B01G012300.2	Wheat	cytosol	23.57	44.03
TraesCS5B01G057300.1	Wheat	cytosol	25.59	23.49

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:2.20.70.90	Gene3D:3.40.50.150	InterPro:C5_MeTfrase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006259
GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740
InterPro:IPR001525	InterPro:IPR015940	InterPro:IPR030380	PFAM:PF00145	PFscan:PS50030	PFscan:PS51680
PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF46934	SUPFAM:SSF53335
EnsemblPlantsGene:TraesCS5B01G239800	EnsemblPlants:TraesCS5B01G239800.1	InterPro:UBA	InterPro:UBA-like_sf	SEG:seg	:

Description

No Description!

Coordinates

chr5B:+:419994780..420000031

Molecular Weight (calculated)

66407.1 Da

IEP (calculated)

5.168

GRAVY (calculated)

-0.513

Length

594 amino acids

Sequence
(BLAST)

001: MVDWTSDNDD SDKFEWESDG EAEPSSAPAF RNLDAAGPST LDSNGWANEE APPTSLVEGY VLMGFPKEMV LKGIKEIGHS DANALLELLL TYKTLGDDAA
101: VGNCSTSGCF PQSVEDDDDF DFENWDGDDD ADGREPNPDS SGDEDFLREM SEKDNKIKSL VDMGFREDEA NMAITRCGMD AALSVLVDSV YASQAAGDCH
201: YGNLSDYEVT GSWGGRKRAR LMEESKKKRK RYGGAAQRRP LDGSHEEPMP LPNPMVGFNL PNDRLRSVTR RLPQQAIGPP FFYYENVALA PKGVWATISR
301: FLYDIEPEFV DSKHLCAAAR KRGYIHNLPI ENRFPLLPLP PKTIFEAFPH YKKWWPSWDP RRQLNCLQTS MSSAKLTERI QCALASSGNP PPKSVQKYVM
401: DECRKWNLVW VGKNKVAHLE PDEVEYLLGF PRDHTRGVGK TERFKSLGNS FQVDTVAYHL SVLKDMYPNG VNVLSLFTGI GGGEVALHRL GIHMRAVVSV
501: EIGEVNRRIL RGWWDQTQTG TLIEIADVKS LTDDRIATFV RRFGGFDLVI GGSPCNNLAG SNRHHRDGLE GEQSALFYHY FRIVDAVKSA MGRM

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.