Factsheet for TraesCS4B01G388900.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G553300.3	Wheat	nucleus	99.5	98.36
TraesCSU01G124200.1	Wheat	nucleus	93.53	93.53
TraesCS4B01G334900.1	Wheat	nucleus	89.39	89.39
TraesCS4B01G388300.1	Wheat	cytosol	28.69	86.93
TraesCS4B01G390500.4	Wheat	nucleus	80.6	80.87
TraesCS3B01G503900.1	Wheat	peroxisome	58.87	78.71
TraesCS5B01G239800.1	Wheat	nucleus	75.12	76.26
TraesCS6B01G369700.1	Wheat	nucleus	72.47	72.23
TraesCS6B01G107600.1	Wheat	nucleus	73.8	71.31
Os11t0109200-00	Rice	plastid	19.4	70.06
TraesCS3B01G504000.1	Wheat	nucleus	59.2	66.85
TraesCS6B01G186600.1	Wheat	nucleus	63.02	66.55
Os03t0110800-01	Rice	nucleus	63.85	64.49
TraesCS4B01G047000.1	Wheat	nucleus	60.36	60.47
Zm00001d048516_P001	Maize	nucleus	60.2	60.2
OQU93413	Sorghum	nucleus	59.87	59.47
EES00541	Sorghum	nucleus	59.7	59.21
Zm00001d044187_P001	Maize	cytosol	23.88	58.78
TraesCS3B01G504200.1	Wheat	nucleus	58.87	58.39
EER95283	Sorghum	nucleus	55.72	58.33
Os12t0108900-00	Rice	cytosol, nucleus	32.01	54.21
OQU87185	Sorghum	cytosol	21.06	53.81
Zm00001d027329_P002	Maize	nucleus	61.36	52.33
TraesCS6B01G152200.1	Wheat	mitochondrion	35.82	45.19
TraesCS4B01G012300.2	Wheat	cytosol	23.05	43.71
TraesCS5B01G057300.1	Wheat	cytosol	24.88	23.18

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525
InterPro:IPR015940	InterPro:IPR030380	PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068
PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF46934	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS4B01G388900
EnsemblPlants:TraesCS4B01G388900.2	InterPro:UBA	InterPro:UBA-like_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr4B:-:665875437..665880695

Molecular Weight (calculated)

67236.2 Da

IEP (calculated)

5.652

GRAVY (calculated)

-0.488

Length

603 amino acids

Sequence
(BLAST)

001: MAGWTSDSDD SDKFEWDNDG VAEPSSAPAM RNFDSPGPST LGSNEWINGE VLPTSLIERY VVMGFPKEMV MKSIKEIGHI DADALLELLL TYKALDDDDA
101: GGNNHSTSGC ILPVVEDDDD LDFENWDGDD DAGGRESSSD DSGYEDFLRE MSERDEKIKS LVNMGFSEDE ANEAIIRCGV DADICVLVDS VSASRVAEDC
201: HSRNLSDHQV TDRCFNSFGG RKKARLMEES RKKRKRYGSG GQGNRPSLDG SDEDSMPLPN PMVGFNLPGY SGPSVTRMLS KLDTGPPFFY YENVARAPKG
301: EWAKISRNLF DIQPEFVDSL HLCAAARKRG YIHNLPIENR SPLLPLPPKT IFEAFPHYKK WWPSWDTRTH LNCLQTCVAS AKLTDRIQRA LVSSSNPPTK
401: SVQKYVMDEC KKWNLVWVGK NKVAPLEPDE MEYILGFPRD HTRGVGKTQR YKSLGNSFQV DTVAYHLSVL RRMFPNGVRV LSLFTGIGGG EVALHKLGIH
501: MRVVVSIEIG EASKKIFKSW WDQTQTGTLI EITDVKSLTN DRVASFISQF GGFDLVIGGS PCNNLAGSNR HHRDGLEGKH SALFYDYVRI LNFVKSAMGG
601: RRM

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.