Factsheet for TraesCS4B01G047000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G046800.1	Wheat	nucleus	90.86	91.02
TraesCS4A01G267400.1	Wheat	nucleus	61.63	86.68
Os11t0109200-00	Rice	plastid	19.27	69.46
TraesCS4B01G388300.1	Wheat	cytosol	22.92	69.35
TraesCS5B01G239800.1	Wheat	nucleus	63.12	63.97
TraesCS3B01G503900.1	Wheat	peroxisome	47.67	63.64
Os03t0110800-01	Rice	nucleus	61.46	61.98
TraesCS4B01G390500.4	Wheat	nucleus	61.3	61.4
TraesCS4B01G334900.1	Wheat	nucleus	61.13	61.03
TraesCS4B01G388900.2	Wheat	nucleus	60.47	60.36
TraesCS6B01G369700.1	Wheat	nucleus	58.97	58.68
Zm00001d044187_P001	Maize	cytosol	23.75	58.37
EES00541	Sorghum	nucleus	58.64	58.06
OQU93413	Sorghum	nucleus	57.97	57.5
TraesCS3B01G504000.1	Wheat	nucleus	51.0	57.49
Zm00001d048516_P001	Maize	nucleus	57.14	57.05
EER95283	Sorghum	nucleus	53.32	55.73
TraesCS6B01G186600.1	Wheat	nucleus	52.82	55.69
TraesCS6B01G107600.1	Wheat	nucleus	56.98	54.97
Os12t0108900-00	Rice	cytosol, nucleus	30.9	52.25
OQU87185	Sorghum	cytosol	19.93	50.85
Zm00001d027329_P002	Maize	nucleus	58.47	49.79
TraesCS3B01G504200.1	Wheat	nucleus	48.17	47.7
TraesCS6B01G152200.1	Wheat	mitochondrion	34.05	42.89
TraesCS4B01G012300.2	Wheat	cytosol	21.93	41.51
TraesCS5B01G057300.1	Wheat	cytosol	26.74	24.88

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525
InterPro:IPR015940	InterPro:IPR030380	PFAM:PF00145	PFAM:PF00627	PFscan:PS50030	PFscan:PS51680
PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF46934	SUPFAM:SSF53335
EnsemblPlantsGene:TraesCS4B01G047000	EnsemblPlants:TraesCS4B01G047000.1	InterPro:UBA	InterPro:UBA-like_sf	SEG:seg	:

Description

No Description!

Coordinates

chr4B:+:34051499..34054976

Molecular Weight (calculated)

67451.5 Da

IEP (calculated)

5.125

GRAVY (calculated)

-0.513

Length

602 amino acids

Sequence
(BLAST)

001: MAVIVDLVSD DDVFELDEGN DGQVGVSSYP ARRNADAPGP SRLVRQDADG MANGATPSAS LVGMYVEMGF PKEMVLKAIK EIGKRDESAV LSLLLAYTED
101: DDSVGSCSTS RRIPQRVEDD DDDDEEEDDD FDFEDWDDDV DAGQRDPHSD GSGDEEFLQE MSQLDKQIKS LVDMGFPEDE ANRALRRCGL DTPMHVLVDS
201: IYASQHDPEV MDENRFSSCV GRKKARFTED SKKRKRYGGG AHGSQPPWDG GHEESISLPK PMVGFGLPGD RPRSVGRWLP AHSMRAPFFY YENVALATKG
301: AWAEISRSLY GIEPEFVDSK YFCAALRKRG YIHNLPTEGR SVLRPIPPKT IFEAFPQYET WWPSWDQRRQ LNCLQTCMAS AKLTERIHRA LANSTDPPTQ
401: AVQKRVLEEC RKWNLVWIGK NKVAALDYLE MEFLLGYPRD HTRGASKKKR DKCLGNSFQV DTVAFHLSVL KDRFPCGMNV LSLFSGIGGA EVALHKLGIR
501: MKTVVSVEIC EASRNILRTW WDQTQDGTLI EFRDVQSLTH EKIASLIRQL GGFDLVIGGS PCNNLAGSNR HHRVGLEGDQ SVLFRDYVRI LNSIKSIMAN
601: VG

Best Arabidopsis Sequence Match ( AT3G17310.1 )
(BLAST)

001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM

Arabidopsis Description

DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.