Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G461300.1 | Wheat | cytosol, nucleus, peroxisome | 89.33 | 89.49 |
| TraesCS4B01G388300.1 | Wheat | cytosol | 28.09 | 75.38 |
| TraesCS3B01G503900.1 | Wheat | peroxisome | 61.61 | 72.95 |
| Os11t0109200-00 | Rice | plastid | 20.97 | 67.07 |
| TraesCS5B01G239800.1 | Wheat | nucleus | 68.16 | 61.28 |
| TraesCS6B01G369700.1 | Wheat | nucleus | 68.73 | 60.66 |
| TraesCS4B01G334900.1 | Wheat | nucleus | 67.6 | 59.87 |
| TraesCS4B01G390500.4 | Wheat | nucleus | 67.04 | 59.57 |
| TraesCS4B01G388900.2 | Wheat | nucleus | 66.85 | 59.2 |
| TraesCS3B01G504200.1 | Wheat | nucleus | 66.85 | 58.72 |
| Zm00001d044187_P001 | Maize | cytosol | 25.47 | 55.51 |
| TraesCS6B01G186600.1 | Wheat | nucleus | 58.24 | 54.47 |
| TraesCS6B01G107600.1 | Wheat | nucleus | 61.61 | 52.72 |
| Os03t0110800-01 | Rice | nucleus | 58.8 | 52.6 |
| EER95283 | Sorghum | nucleus | 56.37 | 52.26 |
| OQU87185 | Sorghum | cytosol | 23.03 | 52.12 |
| TraesCS4B01G047000.1 | Wheat | nucleus | 57.49 | 51.0 |
| Zm00001d048516_P001 | Maize | nucleus | 55.06 | 48.76 |
| EES00541 | Sorghum | nucleus | 55.24 | 48.52 |
| OQU93413 | Sorghum | nucleus | 54.87 | 48.27 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 31.46 | 47.19 |
| Zm00001d027329_P002 | Maize | nucleus | 56.93 | 43.0 |
| TraesCS4B01G012300.2 | Wheat | cytosol | 24.34 | 40.88 |
| TraesCS6B01G152200.1 | Wheat | mitochondrion | 34.27 | 38.28 |
| TraesCS5B01G057300.1 | Wheat | cytosol | 26.78 | 22.1 |
Protein Annotations
| KEGG:00270+2.1.1.37 | MapMan:12.5.1.11 | Gene3D:3.40.50.150 | InterPro:C5_MeTfrase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR001525 | InterPro:IPR030380 | PFAM:PF00145 | PFscan:PS51680 |
| PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS3B01G504000 |
| EnsemblPlants:TraesCS3B01G504000.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:748451799..748455518
Molecular Weight (calculated)
59483.1 Da
IEP (calculated)
7.495
GRAVY (calculated)
-0.347
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFQTEMVVM SIKEIGYSDE NALLELLLTY KALGDEDALG NCSTSGCAPL RVEHGDDLDF ESSNGDDDAS DTQPSSGDCG DENFIRKMSE KDKKINPLVH
101: MGFSENDANM AITRCGMDAD LSVLVDSISA SLVARDFDLS NHQVMNRCSD SFRGTKKIRL MEDRKKKRKR YGGTAHGNQI FLDGSHYEHM PPPNPMVGFS
201: LPNYSQLSVD RKIPKKAIGR PFFYYENVAQ ALTGVWATIS SSLYGIQPEF VDSKHLCAAA RKRGYIHNLP IENRAPLLPL PPKTILEAFP RYKKWWPSWD
301: TRTQFNCLRT SVACQQLTGS IGALARTGNP PPRNIQKDII KQCKVYNLVW IGKNKVAALE PEEIEYLLGF PKDHTRGLAI TNRYKSLGNS FQVDTVAYHL
401: SVLRGMFPNG VTVLSLFTGI GGGEVALHRL GIHMRTVVSV EIDKTSKRIF RGWWDQTQTG TLIEFDDVKS LTDAKVASLV TRFGGFDLVI GGSPCNNLAG
501: CNRYSRDGLE GKESVLFYEY PKILEAVEDA MSRM
101: MGFSENDANM AITRCGMDAD LSVLVDSISA SLVARDFDLS NHQVMNRCSD SFRGTKKIRL MEDRKKKRKR YGGTAHGNQI FLDGSHYEHM PPPNPMVGFS
201: LPNYSQLSVD RKIPKKAIGR PFFYYENVAQ ALTGVWATIS SSLYGIQPEF VDSKHLCAAA RKRGYIHNLP IENRAPLLPL PPKTILEAFP RYKKWWPSWD
301: TRTQFNCLRT SVACQQLTGS IGALARTGNP PPRNIQKDII KQCKVYNLVW IGKNKVAALE PEEIEYLLGF PKDHTRGLAI TNRYKSLGNS FQVDTVAYHL
401: SVLRGMFPNG VTVLSLFTGI GGGEVALHRL GIHMRTVVSV EIDKTSKRIF RGWWDQTQTG TLIEFDDVKS LTDAKVASLV TRFGGFDLVI GGSPCNNLAG
501: CNRYSRDGLE GKESVLFYEY PKILEAVEDA MSRM
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.