Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G140600.1 | Wheat | nucleus | 99.17 | 96.13 |
| TraesCS4B01G390500.4 | Wheat | nucleus | 93.84 | 93.84 |
| TraesCSU01G124200.1 | Wheat | nucleus | 80.7 | 80.43 |
| TraesCS6B01G107600.1 | Wheat | nucleus | 82.7 | 79.65 |
| TraesCSU01G224900.1 | Wheat | peroxisome | 48.59 | 77.87 |
| HORVU4Hr1G089730.3 | Barley | nucleus | 44.09 | 74.23 |
| Os11t0109200-00 | Rice | plastid | 19.3 | 69.46 |
| PGSC0003DMT400040081 | Potato | mitochondrion | 22.46 | 65.53 |
| Os03t0110800-01 | Rice | nucleus | 62.23 | 62.65 |
| Zm00001d048516_P001 | Maize | nucleus | 61.06 | 60.86 |
| OQU93413 | Sorghum | nucleus | 60.9 | 60.3 |
| EES00541 | Sorghum | nucleus | 60.73 | 60.03 |
| Zm00001d044187_P001 | Maize | cytosol | 24.46 | 60.0 |
| EER95283 | Sorghum | nucleus | 56.57 | 59.03 |
| OQU87185 | Sorghum | cytosol | 21.63 | 55.08 |
| Zm00001d027329_P002 | Maize | nucleus | 63.06 | 53.61 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 30.62 | 51.69 |
| VIT_14s0066g01040.t01 | Wine grape | cytosol | 42.93 | 48.5 |
| KRG93258 | Soybean | nucleus | 46.26 | 47.93 |
| KRH69576 | Soybean | nucleus | 42.26 | 47.3 |
| CDY40934 | Canola | nucleus | 33.94 | 47.11 |
| KRH56579 | Soybean | nucleus | 46.09 | 46.95 |
| Bra023480.1-P | Field mustard | cytosol | 34.61 | 46.74 |
| CDX85589 | Canola | nucleus | 34.28 | 46.29 |
| CDX69571 | Canola | nucleus | 42.76 | 46.22 |
| CDY09872 | Canola | nucleus | 42.26 | 45.68 |
| Solyc02g062740.2.1 | Tomato | nucleus | 45.76 | 45.61 |
| Solyc10g078190.1.1 | Tomato | nucleus | 44.76 | 44.17 |
| PGSC0003DMT400004867 | Potato | nucleus | 44.43 | 43.99 |
| CDX91035 | Canola | cytosol | 40.43 | 43.78 |
| Bra008749.1-P | Field mustard | nucleus | 43.76 | 43.76 |
| KRG93790 | Soybean | cytosol | 6.99 | 43.75 |
| PGSC0003DMT400018502 | Potato | nucleus | 44.26 | 43.68 |
| CDX85590 | Canola | cytosol | 40.43 | 43.55 |
| GSMUA_Achr8P33680_001 | Banana | cytosol | 36.77 | 43.42 |
| Solyc04g005250.2.1 | Tomato | nucleus | 42.76 | 42.34 |
| GSMUA_Achr11P... | Banana | nucleus | 32.45 | 42.3 |
| AT5G15380.1 | Thale cress | cytoskeleton, cytosol, nucleus | 43.76 | 42.15 |
| GSMUA_Achr3P23940_001 | Banana | nucleus | 42.1 | 42.1 |
| AT5G14620.1 | Thale cress | nucleus | 43.59 | 41.85 |
| CDY40933 | Canola | cytosol | 41.6 | 39.31 |
| Bra023479.1-P | Field mustard | cytosol | 21.3 | 38.44 |
| Bra004388.1-P | Field mustard | cytosol | 42.1 | 31.08 |
| CDX95928 | Canola | golgi | 42.43 | 27.13 |
Protein Annotations
| KEGG:00270+2.1.1.37 | MapMan:12.5.1.11 | Gene3D:3.40.50.150 | InterPro:C5_MeTfrase | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR001525 | InterPro:IPR030380 | PFAM:PF00145 |
| PFscan:PS51680 | PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF53335 |
| EnsemblPlantsGene:TraesCSU01G140500 | EnsemblPlants:TraesCSU01G140500.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrUn:-:134252119..134256885
Molecular Weight (calculated)
66712.0 Da
IEP (calculated)
5.150
GRAVY (calculated)
-0.548
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MADWTSDSDG SDKFEWDSDG EAEASSAPAM RNFDAPGPST LSSNGWINGE PPPTSLIEGY VAMGFPKEMV VRSSKEIGHG DADALLELLL TYKALGDDDD
101: ALGNHSTSGC NLPIVEDDDD LDFENWDGDD DTGGRESSSD DSGYEEFLRE MSDKDEKINS LRDMGFSEDE ANMAITICGV DADLSVLVDS ISASQVTEVC
201: HSRNLSDHQV TARCFDSFGG KKRARLIEES KKKRKRYGGG AQGKRPSSDG SDEESMPLPN PMVGFNLPGY RGPSMTRVLP ELATGPPYFY YENVARAPKG
301: VWAKITRFLF DIQPEFVDSL HLCAAARKRG YIHNLPTENR SPLLPLPPKT IFEAFPHDKK WWPSWDQRTH FNCLQTCTAS APVTERIQQK LSSSGNPPPQ
401: SVQKYVRHQC SKWNLVWVGK DKAAPLEPHE MEYLLGFPKD HTRGFGKTQR YKSLGNSFQV DTVAYHLSVL RDMFPNGITV LSLFTGIGGG EVALHKLGIH
501: MRAVVSIEIC KANRKILRSW WDQTQTGTLI EIDDVKSLKD DEIASYVHRF GGFDLVIGGS PCNNLAGSNR HHRDGLEGEH SSLFYDYFRI LNSVKSAMAN
601: M
101: ALGNHSTSGC NLPIVEDDDD LDFENWDGDD DTGGRESSSD DSGYEEFLRE MSDKDEKINS LRDMGFSEDE ANMAITICGV DADLSVLVDS ISASQVTEVC
201: HSRNLSDHQV TARCFDSFGG KKRARLIEES KKKRKRYGGG AQGKRPSSDG SDEESMPLPN PMVGFNLPGY RGPSMTRVLP ELATGPPYFY YENVARAPKG
301: VWAKITRFLF DIQPEFVDSL HLCAAARKRG YIHNLPTENR SPLLPLPPKT IFEAFPHDKK WWPSWDQRTH FNCLQTCTAS APVTERIQQK LSSSGNPPPQ
401: SVQKYVRHQC SKWNLVWVGK DKAAPLEPHE MEYLLGFPKD HTRGFGKTQR YKSLGNSFQV DTVAYHLSVL RDMFPNGITV LSLFTGIGGG EVALHKLGIH
501: MRAVVSIEIC KANRKILRSW WDQTQTGTLI EIDDVKSLKD DEIASYVHRF GGFDLVIGGS PCNNLAGSNR HHRDGLEGEH SSLFYDYFRI LNSVKSAMAN
601: M
001: MVMSHIFLIS QIQEVEHGDS DDVNWNTDDD ELAIDNFQFS PSPVHISATS PNSIQNRISD ETVASFVEMG FSTQMIARAI EETAGANMEP MMILETLFNY
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR
101: SASTEASSSK SKVINHFIAM GFPEEHVIKA MQEHGDEDVG EITNALLTYA EVDKLRESED MNININDDDD DNLYSLSSDD EEDELNNSSN EDRILQALIK
201: MGYLREDAAI AIERCGEDAS MEEVVDFICA AQMARQFDEI YAEPDKKELM NNNKKRRTYT ETPRKPNTDQ LISLPKEMIG FGVPNHPGLM MHRPVPIPDI
301: ARGPPFFYYE NVAMTPKGVW AKISSHLYDI VPEFVDSKHF CAAARKRGYI HNLPIQNRFQ IQPPQHNTIQ EAFPLTKRWW PSWDGRTKLN CLLTCIASSR
401: LTEKIREALE RYDGETPLDV QKWVMYECKK WNLVWVGKNK LAPLDADEME KLLGFPRDHT RGGGISTTDR YKSLGNSFQV DTVAYHLSVL KPLFPNGINV
501: LSLFTGIGGG EVALHRLQIK MNVVVSVEIS DANRNILRSF WEQTNQKGIL REFKDVQKLD DNTIERLMDE YGGFDLVIGG SPCNNLAGGN RHHRVGLGGE
601: HSSLFFDYCR ILEAVRRKAR HMRR
Arabidopsis Description
DRM1DNA (cytosine-5)-methyltransferase DRM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXE5]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.