CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93258	Soybean	nucleus	91.02	92.59
HORVU4Hr1G017920.1	Barley	cytosol	9.49	69.14
Os11t0109200-00	Rice	plastid	18.47	65.27
VIT_14s0066g01040.t01	Wine grape	cytosol	57.29	63.53
TraesCS6A01G124200.1	Wheat	peroxisome	22.2	61.22
TraesCSU01G224900.1	Wheat	peroxisome	38.81	61.07
KRG93790	Soybean	cytosol	9.66	59.38
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	43.9	56.92
TraesCS3D01G454900.1	Wheat	peroxisome	42.88	56.1
Zm00001d044187_P001	Maize	cytosol	22.88	55.1
KRH69576	Soybean	nucleus	49.32	54.19
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	42.88	51.84
HORVU6Hr1G081790.1	Barley	nucleus	46.95	51.3
Os03t0110800-01	Rice	nucleus	49.83	49.25
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	35.76	48.62
TraesCS5A01G241800.1	Wheat	nucleus	50.51	48.22
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	43.56	48.22
GSMUA_Achr8P33680_001	Banana	cytosol	41.53	48.13
Zm00001d048516_P001	Maize	nucleus	48.98	47.93
TraesCS5D01G248300.1	Wheat	nucleus	50.17	47.9
HORVU3Hr1G098970.1	Barley	nucleus	40.68	47.34
OQU93413	Sorghum	nucleus	48.47	47.12
EER95283	Sorghum	nucleus	45.93	47.05
EES00541	Sorghum	nucleus	48.47	47.04
TraesCSU01G124200.1	Wheat	nucleus	47.97	46.93
TraesCS6A01G338800.1	Wheat	nucleus	47.97	46.78
TraesCS6D01G319500.2	Wheat	nucleus	47.97	46.78
HORVU4Hr1G089730.3	Barley	nucleus	27.97	46.22
TraesCSU01G140500.1	Wheat	nucleus	46.95	46.09
TraesCS5A01G553300.3	Wheat	nucleus	47.12	45.57
GSMUA_Achr11P...	Banana	nucleus	35.59	45.55
TraesCS4B01G012300.2	Wheat	cytosol	24.41	45.28
OQU87185	Sorghum	cytosol	17.97	44.92
TraesCSU01G140600.1	Wheat	nucleus	47.12	44.84
GSMUA_Achr3P23940_001	Banana	nucleus	45.42	44.59
TraesCS4D01G046800.1	Wheat	nucleus	43.56	42.76
TraesCS4A01G267400.1	Wheat	nucleus	30.85	42.52
Os12t0108900-00	Rice	cytosol, nucleus	25.59	42.42
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	40.34	41.18
Zm00001d027329_P002	Maize	nucleus	49.15	41.02
TraesCS3A01G461500.1	Wheat	nucleus	44.41	40.81
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	40.0	40.55
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	39.66	39.73
TraesCS3A01G067600.1	Wheat	nucleus	43.22	33.6
TraesCS6D01G114500.1	Wheat	mitochondrion	27.12	33.54
KRH50633	Soybean	cytosol	30.85	26.22
KRH02428	Soybean	nucleus	31.19	25.24
HORVU7Hr1G000490.1	Barley	cytosol	1.19	21.88

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	EntrezGene:100785996	MapMan:12.5.1.11	Gene3D:3.40.50.150	EMBL:ACUP02002786
InterPro:C5_MeTfrase	EnsemblPlantsGene:GLYMA_05G005600	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0006259
GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740
UniProt:I1K1I2	InterPro:IPR001525	InterPro:IPR030380	ProteinID:KRH56578.1	EnsemblPlants:KRH56579	ProteinID:KRH56579
ProteinID:KRH56579.1	PFAM:PF00145	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases
InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	UniParc:UPI0002339DF5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:491888..498240

Molecular Weight (calculated)

66686.5 Da

IEP (calculated)

4.697

GRAVY (calculated)

-0.522

Length

590 amino acids

Sequence
(BLAST)

001: MGGDDSGLES DNFDWNTEDE LEIQNYNSSS SCLTLPNGDA VTGSGEASSS AVLANSKVLD HFVSMGFSRE MVSKVIQEYG EENEDKLLEE LLTYKALESS
101: SRPQQRIEPD PCSSENAGSS WDDFSDTDIF SDDEEIAKTM SENDDTLRSL VKMGYKQVEA LIAIERLGPN ASLEELVDFI GVAQMAKAED ALLPPQEKLQ
201: YNDYAKSNKR RLYDYEVLGR KKPRGCEKKI LNEDDEDAEA LHLPNPMIGF GVPTESSFIT HRRLPEDAIG PPYFYYENVA LAPKGVWQTI SRFLYDVEPE
301: FVDSKFFCAA ARKRGYIHNL PIQNRFPLLP LPPRTIHEAF PLTKKWWPSW DIRTKLNCLQ TCIGSAKLTE RIRKAVEIYD EDPPESVQKY VLHQCRKWNL
401: VWVGRNKVAP LEPDEVETLL GFPRNHTRGG GISRTDRYKS LGNSFQVDTV AYHLSVLKEM YPNGINLLSL FSGIGGAEVA LHRLGIPLKN VVSVEKSEVN
501: RNIVRSWWEQ TNQKGNLYDM DDVRELDGDR LEQLMSTFGG FDLIVGGSPC NNLAGSNRVS RDGLEGKESS LFFDYFRILD LVKNMSAKYR

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.