Factsheet for VIT_14s0066g01040.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040081	Potato	mitochondrion	28.95	74.76
HORVU4Hr1G017920.1	Barley	cytosol	9.77	64.2
Os11t0109200-00	Rice	plastid	19.55	62.28
KRG93258	Soybean	nucleus	62.78	57.59
TraesCSU01G224900.1	Wheat	peroxisome	40.41	57.33
KRH56579	Soybean	nucleus	63.53	57.29
TraesCS6A01G124200.1	Wheat	peroxisome	22.74	56.54
Solyc02g062740.2.1	Tomato	nucleus	62.97	55.56
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	46.05	53.85
TraesCS3D01G454900.1	Wheat	peroxisome	45.3	53.44
PGSC0003DMT400004867	Potato	nucleus	60.71	53.21
Solyc04g005250.2.1	Tomato	nucleus	60.34	52.88
Solyc10g078190.1.1	Tomato	nucleus	59.59	52.05
PGSC0003DMT400018502	Potato	nucleus	59.21	51.72
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	46.8	51.02
HORVU6Hr1G081790.1	Barley	nucleus	50.56	49.81
Zm00001d044187_P001	Maize	cytosol	22.56	48.98
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	39.1	47.93
GSMUA_Achr11P...	Banana	nucleus	40.6	46.85
Os03t0110800-01	Rice	nucleus	52.07	46.4
TraesCS4B01G012300.2	Wheat	cytosol	27.63	46.23
GSMUA_Achr8P33680_001	Banana	cytosol	43.8	45.78
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	44.92	44.84
Zm00001d048516_P001	Maize	nucleus	50.75	44.78
TraesCS6A01G338800.1	Wheat	nucleus	50.56	44.46
OQU93413	Sorghum	nucleus	50.38	44.15
EER95283	Sorghum	nucleus	47.74	44.1
EES00541	Sorghum	nucleus	50.19	43.91
TraesCS6D01G319500.2	Wheat	nucleus	49.81	43.8
GSMUA_Achr3P23940_001	Banana	nucleus	49.44	43.76
OQU87185	Sorghum	cytosol	19.36	43.64
HORVU3Hr1G098970.1	Barley	nucleus	41.54	43.59
Os12t0108900-00	Rice	cytosol, nucleus	29.14	43.54
TraesCS5A01G241800.1	Wheat	nucleus	50.56	43.53
TraesCS5D01G248300.1	Wheat	nucleus	50.38	43.37
TraesCSU01G140500.1	Wheat	nucleus	48.5	42.93
TraesCSU01G124200.1	Wheat	nucleus	48.31	42.62
HORVU4Hr1G089730.3	Barley	nucleus	28.38	42.3
TraesCS5A01G553300.3	Wheat	nucleus	48.12	41.97
TraesCSU01G140600.1	Wheat	nucleus	48.5	41.61
TraesCS4D01G046800.1	Wheat	nucleus	44.92	39.77
TraesCS4A01G267400.1	Wheat	nucleus	31.77	39.49
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	42.86	39.45
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	43.05	39.35
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	42.11	38.03
Zm00001d027329_P002	Maize	nucleus	50.19	37.77
TraesCS3A01G461500.1	Wheat	nucleus	44.92	37.23
TraesCS6D01G114500.1	Wheat	mitochondrion	30.26	33.75
TraesCS3A01G067600.1	Wheat	nucleus	44.92	31.49
VIT_05s0020g00450.t01	Wine grape	nucleus	35.53	26.54
HORVU7Hr1G000490.1	Barley	cytosol	1.13	18.75

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	EntrezGene:100254189	wikigene:100254189	MapMan:12.5.1.11	Gene3D:3.40.50.150
InterPro:C5_MeTfrase	ProteinID:CCB58503	ProteinID:CCB58503.1	UniProt:F6HUY5	EMBL:FN596252	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR015940	InterPro:IPR030380
EntrezGene:LOC100254189	wikigene:LOC100254189	PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068
PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	InterPro:UBA	UniParc:UPI00021096E8
ArrayExpress:VIT_14s0066g01040	EnsemblPlantsGene:VIT_14s0066g01040	EnsemblPlants:VIT_14s0066g01040.t01	unigene:Vvi.17748	RefSeq:XP_002273972	RefSeq:XP_002273972.2

Description

No Description!

Coordinates

chr14:-:27478378..27484652

Molecular Weight (calculated)

60243.4 Da

IEP (calculated)

4.886

GRAVY (calculated)

-0.439

Length

532 amino acids

Sequence
(BLAST)

001: MGMGFSEKMV VKAIEQDGEG NTDSILEYLL TYSALENCPQ ELENSPQAEP QVVSDNCSSD YDESFLDDFS DTDSCHENQE NINSLSDKEK KLLFLADMGY
101: TVEEASIAMD RCGPDSSVVE LTDFISAAQI SKAADADLGE LSDEEKPRPK HLYKDYNKQK KRKFLDYRLW ERKKQRGYEK KLRNEDDEPI RLPNPMVGFG
201: VPAEPCPVFH RTLPEAAVGP PYFYYENVAL APKGVWSTIS RFLYDVEPEF VDSKYFCATA RKRGYIHNLP IQNRFPLLPL PPLTIYEALP LTRKWWPSWD
301: TRTKLNCIQT CVGSAKLTDR IRKALEEWDG VPPMSVQKYV LDECRKWNLV WVGRNKLAPL EPDEVEMLLG FPRNHTRGGG ISRTDRYKSL GNSFQVDTVA
401: YHFSVLKDMF PGGITLLSLF SGIGGAEIAL HRLGIPLKNV VAVEISETNR NILRSWWEQT NQRGTLVDIA DVQQLNGDRL EQLIHTFGGF DLIVGGSPCN
501: NLAGSNRVSR DGLEVTSPNI IWPFSEWLCC LG

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.