Factsheet for PGSC0003DMT400040081

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G017920.1	Barley	cytosol	27.18	69.14
Os11t0109200-00	Rice	plastid	52.91	65.27
TraesCS6A01G124200.1	Wheat	peroxisome	63.59	61.22
Zm00001d044187_P001	Maize	cytosol	57.77	48.57
KRG93790	Soybean	cytosol	17.96	38.54
TraesCSU01G224900.1	Wheat	peroxisome	64.08	35.2
Solyc02g062740.2.1	Tomato	nucleus	99.51	34.0
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	66.02	29.89
PGSC0003DMT400018502	Potato	nucleus	87.86	29.72
TraesCS3D01G454900.1	Wheat	peroxisome	65.05	29.71
PGSC0003DMT400004867	Potato	nucleus	85.92	29.16
VIT_14s0066g01040.t01	Wine grape	cytosol	74.76	28.95
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	65.05	27.46
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	54.85	26.04
HORVU6Hr1G081790.1	Barley	nucleus	66.99	25.56
EER95283	Sorghum	nucleus	70.39	25.17
TraesCS4A01G267400.1	Wheat	nucleus	51.46	24.77
HORVU3Hr1G098970.1	Barley	nucleus	60.68	24.65
Os03t0110800-01	Rice	nucleus	71.36	24.62
Zm00001d048516_P001	Maize	nucleus	71.36	24.38
EES00541	Sorghum	nucleus	71.36	24.18
OQU93413	Sorghum	nucleus	70.87	24.05
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	62.14	24.02
TraesCSU01G124200.1	Wheat	nucleus	66.99	22.89
TraesCS5D01G248300.1	Wheat	nucleus	68.45	22.82
TraesCS5A01G241800.1	Wheat	nucleus	68.45	22.82
TraesCS6D01G319500.2	Wheat	nucleus	66.99	22.81
TraesCS6A01G338800.1	Wheat	nucleus	66.99	22.81
TraesCSU01G140500.1	Wheat	nucleus	65.53	22.46
TraesCS5A01G553300.3	Wheat	nucleus	66.02	22.3
TraesCS4D01G046800.1	Wheat	nucleus	63.59	21.8
TraesCSU01G140600.1	Wheat	nucleus	65.53	21.77
Zm00001d027329_P002	Maize	nucleus	72.33	21.07
GSMUA_Achr8P33680_001	Banana	cytosol	50.49	20.43
TraesCS3A01G461500.1	Wheat	nucleus	63.59	20.41
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	56.8	20.24
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	56.31	19.93
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	54.85	19.19
TraesCS3A01G067600.1	Wheat	nucleus	66.5	18.05
GSMUA_Achr11P...	Banana	nucleus	39.32	17.57
GSMUA_Achr3P23940_001	Banana	nucleus	50.0	17.14
HORVU7Hr1G000490.1	Barley	cytosol	1.94	12.5
TraesCS4B01G012300.2	Wheat	cytosol	18.45	11.95
Os12t0108900-00	Rice	cytosol, nucleus	19.9	11.52
HORVU4Hr1G089730.3	Barley	nucleus	19.9	11.48
TraesCS6D01G114500.1	Wheat	mitochondrion	23.79	10.27
OQU87185	Sorghum	cytosol	3.88	3.39

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:3.40.50.150	MapMan:50.2.1	InterPro:C5_MeTfrase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR030380	UniProt:M1B995	PFAM:PF00145
EnsemblPlantsGene:PGSC0003DMG400015504	PGSC:PGSC0003DMG400015504	EnsemblPlants:PGSC0003DMT400040081	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3
InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	UniParc:UPI0002957E94	SEG:seg	:

Description

DNA methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400015504]

Coordinates

chr2:+:21138702..21143052

Molecular Weight (calculated)

23334.9 Da

IEP (calculated)

8.201

GRAVY (calculated)

-0.330

Length

206 amino acids

Sequence
(BLAST)

001: MRVQKFVLDQ CRKWNLVWVG RNKVAPLEPD EFEMLLGFPK NHTRGGGISR TDRYKSLGNS FQVDTVAYHL SVLKDMFPNG MNVLSLFSGI GGAEVALYRL
101: GIQLNNVVSV EKSEVNRNIV RSWWEQTNQR GNLIDFDDVQ QLNGDRLEQL IDSFGGFDLL IGGSPCNNLA GSNRVSRDGL EGKESSLFYD YVRILDLVKS
201: IMSRQR

Best Arabidopsis Sequence Match ( AT3G17310.1 )
(BLAST)

001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM

Arabidopsis Description

DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.