CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56579	Soybean	nucleus	92.59	91.02
HORVU4Hr1G017920.1	Barley	cytosol	9.66	69.14
Os11t0109200-00	Rice	plastid	18.97	65.87
VIT_14s0066g01040.t01	Wine grape	cytosol	57.59	62.78
TraesCSU01G224900.1	Wheat	peroxisome	39.83	61.6
TraesCS6A01G124200.1	Wheat	peroxisome	22.59	61.22
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	45.0	57.36
KRG93790	Soybean	cytosol	9.48	57.29
TraesCS3D01G454900.1	Wheat	peroxisome	43.97	56.54
Zm00001d044187_P001	Maize	cytosol	23.28	55.1
KRH69576	Soybean	nucleus	50.34	54.38
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	43.79	52.05
HORVU6Hr1G081790.1	Barley	nucleus	47.59	51.11
Os03t0110800-01	Rice	nucleus	50.86	49.41
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	36.72	49.08
GSMUA_Achr8P33680_001	Banana	cytosol	42.76	48.72
HORVU3Hr1G098970.1	Barley	nucleus	42.07	48.13
Zm00001d048516_P001	Maize	nucleus	50.0	48.09
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	44.14	48.03
TraesCS5A01G241800.1	Wheat	nucleus	51.03	47.9
EES00541	Sorghum	nucleus	50.0	47.7
OQU93413	Sorghum	nucleus	49.83	47.61
TraesCS5D01G248300.1	Wheat	nucleus	50.69	47.57
EER95283	Sorghum	nucleus	47.07	47.4
TraesCSU01G124200.1	Wheat	nucleus	48.97	47.1
TraesCS6A01G338800.1	Wheat	nucleus	48.28	46.28
TraesCSU01G140500.1	Wheat	nucleus	47.93	46.26
TraesCS4B01G012300.2	Wheat	cytosol	25.34	46.23
TraesCS6D01G319500.2	Wheat	nucleus	48.1	46.12
HORVU4Hr1G089730.3	Barley	nucleus	28.28	45.94
TraesCS5A01G553300.3	Wheat	nucleus	47.93	45.57
TraesCSU01G140600.1	Wheat	nucleus	48.1	45.0
OQU87185	Sorghum	cytosol	18.28	44.92
GSMUA_Achr11P...	Banana	nucleus	35.69	44.9
GSMUA_Achr3P23940_001	Banana	nucleus	46.03	44.43
TraesCS4D01G046800.1	Wheat	nucleus	43.79	42.26
Os12t0108900-00	Rice	cytosol, nucleus	25.86	42.13
TraesCS4A01G267400.1	Wheat	nucleus	31.03	42.06
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	41.38	41.52
TraesCS3A01G461500.1	Wheat	nucleus	45.86	41.43
Zm00001d027329_P002	Maize	nucleus	50.34	41.3
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	41.03	40.89
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	40.69	40.07
TraesCS6D01G114500.1	Wheat	mitochondrion	27.93	33.96
TraesCS3A01G067600.1	Wheat	nucleus	43.28	33.07
KRH50633	Soybean	cytosol	31.21	26.08
KRH02428	Soybean	nucleus	31.38	24.97
HORVU7Hr1G000490.1	Barley	cytosol	1.21	21.88

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	EntrezGene:100815925	MapMan:12.5.1.11	Gene3D:3.40.50.150	EMBL:ACUP02011545
InterPro:C5_MeTfrase	EnsemblPlantsGene:GLYMA_19G006100	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0006259
GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740
InterPro:IPR001525	InterPro:IPR015940	InterPro:IPR030380	UniProt:K7MVN8	EnsemblPlants:KRG93258	ProteinID:KRG93258
ProteinID:KRG93258.1	ProteinID:KRG93259.1	PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068
PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	InterPro:UBA	UniParc:UPI0002952466
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:563133..572838

Molecular Weight (calculated)

65798.3 Da

IEP (calculated)

4.617

GRAVY (calculated)

-0.551

Length

580 amino acids

Sequence
(BLAST)

001: MGGDDFDWNT DDELEIENYN SSSSCLTLPN GDAGEASSSA VLANSKVLDH FVNMGFSREM VSKVIQEYGE ENEDKLLEEL LSYKALESSP QPQQRIEPDP
101: CSSENAGSSW DDFSDTDIFS DDEEIAKTMS ENDDTLRSLV KMGYKQEEAL VAIERLGPNA SLEELVDFIG VAQMAKAEDA LLPPEEKLQY NDYAKSNKRR
201: FYDYEVLGRK KPRGCEKKIL NEDDDEEDEA LHLPNPMIGF GVPTESSFIT HRRIPEDAIG PPYFYYENVA LAPKGVWQTI SRFLYDVQPE FVDSKFFCAA
301: ARKRGYIHNL PIQNRFPLLP LPPRTIHEAF PLTKKWWPSW DTRTKLNCLQ TCIGSAKLTE RIRKAVEIYD EDPPESVQKF VLHQCRKWNL VWVGRNKVAP
401: LEPDEVETLL GFPRNHTRGG GISRTDRYKS LGNSFQVDTV AYHLSVLKEM YPNGINLLSL FSGIGGAEVA LHRLGIPLKN VVSVEKSEVN RNIVRSWWEQ
501: TNQKGNLYDI DDVRELDGDR LEQLMSTFGG FDLIVGGSPC NNLAGSNRVS RDGLEGKESS LFFDYFRILD LVKNMSAKYR

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.