Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92125 | Canola | plasma membrane, vacuole | 88.62 | 89.82 |
| CDX95858 | Canola | cytosol | 68.53 | 86.85 |
| AT3G17310.1 | Thale cress | cytosol | 53.68 | 67.75 |
| Bra031188.1-P | Field mustard | nucleus | 25.89 | 40.56 |
| VIT_05s0020g00450.t01 | Wine grape | nucleus | 30.69 | 38.62 |
| KRH50633 | Soybean | cytosol | 28.46 | 36.74 |
| KRH02428 | Soybean | nucleus | 29.35 | 36.08 |
| TraesCS5D01G062400.2 | Wheat | cytosol | 24.0 | 33.23 |
| TraesCS5B01G057300.1 | Wheat | cytosol | 23.77 | 32.92 |
| HORVU5Hr1G012110.2 | Barley | cytosol | 22.99 | 31.89 |
| Os05t0133900-02 | Rice | nucleus | 24.11 | 31.76 |
| GSMUA_Achr10P... | Banana | cytosol | 14.96 | 31.46 |
| TraesCS4A01G495700.1 | Wheat | cytosol | 17.3 | 31.0 |
| KXG21224 | Sorghum | cytosol | 22.43 | 30.64 |
| Solyc05g053260.2.1 | Tomato | cytosol | 19.08 | 30.48 |
| TraesCS5A01G051400.2 | Wheat | nucleus | 23.77 | 29.75 |
| Zm00001d010928_P001 | Maize | nucleus | 21.88 | 29.74 |
| Bra023479.1-P | Field mustard | cytosol | 10.71 | 28.83 |
| TraesCS7D01G003200.1 | Wheat | nucleus | 19.98 | 28.78 |
| Bra023480.1-P | Field mustard | cytosol | 14.29 | 28.76 |
| HORVU7Hr1G000410.34 | Barley | mitochondrion | 18.75 | 28.38 |
| TraesCS7A01G002900.3 | Wheat | plastid | 19.31 | 27.77 |
| Bra008749.1-P | Field mustard | nucleus | 18.19 | 27.12 |
| Bra004388.1-P | Field mustard | cytosol | 17.86 | 19.66 |
Protein Annotations
| Gene3D:1.10.110.10 | Gene3D:3.40.50.150 | MapMan:35.1 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | EnsemblPlantsGene:Bra022208 |
| EnsemblPlants:Bra022208.1 | EnsemblPlants:Bra022208.1-P | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| InterPro:IPR030380 | UniProt:M4E0B1 | PFAM:PF14368 | PFscan:PS51680 | PANTHER:PTHR23068 | PANTHER:PTHR23068:SF11 |
| InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF47699 | SUPFAM:SSF53335 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0002547615 | SEG:seg | : | : | : | : |
Description
AT3G17310 (E=5e-306) | methyltransferase family protein
Coordinates
chrA05:+:19069030..19074815
Molecular Weight (calculated)
98081.5 Da
IEP (calculated)
4.753
GRAVY (calculated)
-0.266
Length
896 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQTTTTTTL LLLSTLLIAA IVVNGQGAKA PPPNAGMVCD ANLGLCAAAL KVGAKSSEEC CTSLEKAVKT QLKCLCAILT NPQVLAGFNL TVENALLIPK
101: SCGIDAGPSM CSAAKAPLPH GVPPVPGPPK GEKDAASNLA GTGLKLFGST MKLLLDAPSG SEDHAPLYSA ISFLGFFPPP DWTRTTATSM HLPDQGNFRR
201: GEGGGGSSGH ERNEHMVFPK PETIDFDLPC DTSYPQQFGD NAASSSGSNV KSLLIEMGFC PTLVQKAIDE NGEDDLELLL EILTKSSVTE HPEPSFHGLM
301: EPKPEPDTEY EVDGKRMALL GMKFPENLVD FALDRLGKDA QIDVMVDFIV AAQLAEKFAE ESDESLDDTE INEEDEDVIP VAARGPEVPN EVLFETMDKT
401: LHLLEMGFSN HEISIAIEKI GTEGQISDLA ETIVTGEAPR LIPNDLEEIE KKVSAAPAAT CLSKSWRFLG VGAEKVDSGR GSSSGAADIK PDTSTDPLPF
501: STTANVGETS RGKRLKDEDD NAFLDEFSDF DDRGKRPRPE YMETPWMQDD KDNTYGFSSA MQPRLSQTLS PDVATRPYFF YGNLSEISPR WCSKISGYLF
601: GIHPEHVDTR LCSALRRTEG YVHNLPVENR FNILPKPLLT IQDAMPHMKS WWPQWDVRKH LSSVACSDID YATTLCERLG RRLAECKGKP SQQDQTIILR
701: HCHTSNLIWI APNILSPVEP EHLECIMGYP TNHTKIGGAR YAERLKLFEF CFQTDTLGYH LSVLKSLFPE GLTVLSLFSG IGGAEITLNR LGIHLKNVVS
801: VEHCGLSRNI LKRWWQSSGQ TGELVQIEAI RSLSTNKLEA LVERFGGFDF VICQNPPIPP DLSKETGSNE ARDFDYSLFN EFVRVTKRVI HVMASS
101: SCGIDAGPSM CSAAKAPLPH GVPPVPGPPK GEKDAASNLA GTGLKLFGST MKLLLDAPSG SEDHAPLYSA ISFLGFFPPP DWTRTTATSM HLPDQGNFRR
201: GEGGGGSSGH ERNEHMVFPK PETIDFDLPC DTSYPQQFGD NAASSSGSNV KSLLIEMGFC PTLVQKAIDE NGEDDLELLL EILTKSSVTE HPEPSFHGLM
301: EPKPEPDTEY EVDGKRMALL GMKFPENLVD FALDRLGKDA QIDVMVDFIV AAQLAEKFAE ESDESLDDTE INEEDEDVIP VAARGPEVPN EVLFETMDKT
401: LHLLEMGFSN HEISIAIEKI GTEGQISDLA ETIVTGEAPR LIPNDLEEIE KKVSAAPAAT CLSKSWRFLG VGAEKVDSGR GSSSGAADIK PDTSTDPLPF
501: STTANVGETS RGKRLKDEDD NAFLDEFSDF DDRGKRPRPE YMETPWMQDD KDNTYGFSSA MQPRLSQTLS PDVATRPYFF YGNLSEISPR WCSKISGYLF
601: GIHPEHVDTR LCSALRRTEG YVHNLPVENR FNILPKPLLT IQDAMPHMKS WWPQWDVRKH LSSVACSDID YATTLCERLG RRLAECKGKP SQQDQTIILR
701: HCHTSNLIWI APNILSPVEP EHLECIMGYP TNHTKIGGAR YAERLKLFEF CFQTDTLGYH LSVLKSLFPE GLTVLSLFSG IGGAEITLNR LGIHLKNVVS
801: VEHCGLSRNI LKRWWQSSGQ TGELVQIEAI RSLSTNKLEA LVERFGGFDF VICQNPPIPP DLSKETGSNE ARDFDYSLFN EFVRVTKRVI HVMASS
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.