Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G057300.1 | Wheat | cytosol | 97.68 | 97.68 |
| HORVU5Hr1G012110.2 | Barley | cytosol | 89.95 | 90.09 |
| TraesCS5A01G051400.2 | Wheat | nucleus | 95.21 | 86.03 |
| Zm00001d010928_P001 | Maize | nucleus | 61.21 | 60.09 |
| KXG21224 | Sorghum | cytosol | 57.5 | 56.71 |
| Os05t0133900-02 | Rice | nucleus | 59.35 | 56.47 |
| TraesCS7D01G003200.1 | Wheat | nucleus | 47.45 | 49.36 |
| KRH50633 | Soybean | cytosol | 38.02 | 35.45 |
| GSMUA_Achr10P... | Banana | cytosol | 23.03 | 34.98 |
| VIT_05s0020g00450.t01 | Wine grape | nucleus | 38.49 | 34.97 |
| KRH02428 | Soybean | nucleus | 38.49 | 34.16 |
| TraesCS3D01G454900.1 | Wheat | peroxisome | 21.64 | 31.04 |
| CDX95858 | Canola | cytosol | 33.23 | 30.41 |
| AT3G17310.1 | Thale cress | cytosol | 33.23 | 30.28 |
| Solyc05g053260.2.1 | Tomato | cytosol | 24.57 | 28.34 |
| CDY13817 | Canola | plastid | 23.65 | 28.02 |
| Bra031188.1-P | Field mustard | nucleus | 24.57 | 27.8 |
| CDX82030 | Canola | endoplasmic reticulum | 23.96 | 27.58 |
| TraesCS4D01G046800.1 | Wheat | nucleus | 25.04 | 26.96 |
| TraesCS6D01G319500.2 | Wheat | nucleus | 23.8 | 25.45 |
| TraesCS6D01G147500.2 | Wheat | cytosol, nucleus, peroxisome | 22.57 | 25.09 |
| TraesCS5D01G248300.1 | Wheat | nucleus | 23.65 | 24.76 |
| CDX92125 | Canola | plasma membrane, vacuole | 32.92 | 24.09 |
| Bra022208.1-P | Field mustard | plasma membrane, vacuole | 33.23 | 24.0 |
| TraesCS6D01G114500.1 | Wheat | mitochondrion | 13.76 | 18.66 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G062400.2 | EnsemblPlantsGene:TraesCS5D01G062400 | Gene3D:3.40.50.150 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:IPR030380 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM |
| PANTHER:PTHR23068 | PANTHER:PTHR23068:SF11 | PFscan:PS51680 | SEG:seg | SUPFAM:SSF53335 | TIGR:cd02440 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:58256205..58271970
Molecular Weight (calculated)
72070.9 Da
IEP (calculated)
5.005
GRAVY (calculated)
-0.454
Length
647 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKIEDCDGD GAADPPQPNP APAPAAVKAE EAIDDGQPGS SSSYLRSHFI GMGFSPILVD KMLQKHGDHD SNTILESLLS HHNSGSESSS SLGSLFDSDN
101: EENSSKQDIK PEPDSFSERR SYLLRTMNFS QTEVDLAFNQ LGEDALLDQL VDFIVTAQGG VLPGDMENGH ATNEVKAESL FGVMDKTLHL LQMGFTEEEV
201: SLAIDSFGQE AAVQELADSI FARRIASTIE QKQVKIESEF LGEQGEQETE YSTYHQRLNY YDDDDDNKRV KKAKHIFRDD RGASSSHAVN QPTPWLSGGV
301: GSAGDGYLKE EDYEMTLGPR ANVSGELAKP PFFLYGNVVN ITKDAWSEIS GFLSGVRPEF INSQLFSALM RREGYLHNLP TERRHVVVPK SPMTIEDAVP
401: STRHYWPTWD TRKHIGSVTS EVAGIEQLCE MLGKTIKDSR GLLSEEKRAQ ILHQCKMANL IWIGQDRLGP LQPNQMERIL GYPSNHTNLF GLNPPDRIAA
501: MKYAFQTDTI AYLLSVLKDI YPDGLRVLSI YSGVGGAEIA LHRLGIPLKC VVSVEESDVN RKILKRWWAK TEQSGVLRQL NGIWKLKTDA LEDLFKEFGG
601: FDLVVGGNYS SYRGGTTVNA TMGMDSSKYF EYVRVLQRVR SMQHFYK
101: EENSSKQDIK PEPDSFSERR SYLLRTMNFS QTEVDLAFNQ LGEDALLDQL VDFIVTAQGG VLPGDMENGH ATNEVKAESL FGVMDKTLHL LQMGFTEEEV
201: SLAIDSFGQE AAVQELADSI FARRIASTIE QKQVKIESEF LGEQGEQETE YSTYHQRLNY YDDDDDNKRV KKAKHIFRDD RGASSSHAVN QPTPWLSGGV
301: GSAGDGYLKE EDYEMTLGPR ANVSGELAKP PFFLYGNVVN ITKDAWSEIS GFLSGVRPEF INSQLFSALM RREGYLHNLP TERRHVVVPK SPMTIEDAVP
401: STRHYWPTWD TRKHIGSVTS EVAGIEQLCE MLGKTIKDSR GLLSEEKRAQ ILHQCKMANL IWIGQDRLGP LQPNQMERIL GYPSNHTNLF GLNPPDRIAA
501: MKYAFQTDTI AYLLSVLKDI YPDGLRVLSI YSGVGGAEIA LHRLGIPLKC VVSVEESDVN RKILKRWWAK TEQSGVLRQL NGIWKLKTDA LEDLFKEFGG
601: FDLVVGGNYS SYRGGTTVNA TMGMDSSKYF EYVRVLQRVR SMQHFYK
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.