Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G002900.3 | Wheat | plastid | 83.12 | 82.99 |
| HORVU7Hr1G000410.34 | Barley | mitochondrion | 58.2 | 61.15 |
| TraesCS5D01G062400.2 | Wheat | cytosol | 49.36 | 47.45 |
| Zm00001d010928_P001 | Maize | nucleus | 45.5 | 42.94 |
| KXG21224 | Sorghum | cytosol | 44.05 | 41.77 |
| Os05t0133900-02 | Rice | nucleus | 45.5 | 41.62 |
| GSMUA_Achr10P... | Banana | cytosol | 20.9 | 30.52 |
| VIT_05s0020g00450.t01 | Wine grape | nucleus | 33.92 | 29.63 |
| TraesCS3D01G454900.1 | Wheat | peroxisome | 21.38 | 29.49 |
| KRH50633 | Soybean | cytosol | 32.32 | 28.96 |
| KRH02428 | Soybean | nucleus | 32.64 | 27.85 |
| CDX95858 | Canola | cytosol | 29.42 | 25.88 |
| CDY13817 | Canola | plastid | 22.51 | 25.64 |
| Solyc05g053260.2.1 | Tomato | cytosol | 22.99 | 25.49 |
| TraesCS4D01G046800.1 | Wheat | nucleus | 24.44 | 25.29 |
| TraesCS6D01G147500.2 | Wheat | cytosol, nucleus, peroxisome | 23.47 | 25.09 |
| AT3G17310.1 | Thale cress | cytosol | 28.46 | 24.93 |
| CDX82030 | Canola | endoplasmic reticulum | 22.51 | 24.91 |
| TraesCS5D01G248300.1 | Wheat | nucleus | 24.6 | 24.76 |
| Bra031188.1-P | Field mustard | nucleus | 22.35 | 24.3 |
| TraesCS6D01G319500.2 | Wheat | nucleus | 23.47 | 24.13 |
| CDX92125 | Canola | plasma membrane, vacuole | 28.62 | 20.14 |
| Bra022208.1-P | Field mustard | plasma membrane, vacuole | 28.78 | 19.98 |
| TraesCS6D01G114500.1 | Wheat | mitochondrion | 13.67 | 17.82 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G003200.1 | EnsemblPlantsGene:TraesCS7D01G003200 | Gene3D:3.40.50.150 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:IPR030380 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM |
| PANTHER:PTHR23068 | PANTHER:PTHR23068:SF11 | PFscan:PS51680 | SEG:seg | SUPFAM:SSF53335 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7D:+:1974076..1979856
Molecular Weight (calculated)
69755.8 Da
IEP (calculated)
5.498
GRAVY (calculated)
-0.414
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQNTGSGS ASSLGSLFDS DDEENSAPSV LSIEANPDTE ELDSSSKKRS YLLSKMSFSK QHVDLAVSEL GEGASIDQLV NWIVTAQEAT TEGNAEFLPA
101: QMDKPHSLLQ MGFTQQEVSI AIEAFGQEAK VEELADAILA RRIANNIEQK EETAELLPEV MDKPLSLLKM GFNKEEVSSV IAIFGEEATV EELADSIFAR
201: RFSNTTQQKK VRIESEFPDE TETEYSISRL RFYDDYDANI RRKKAKHAFG DDRRASSSQN VNQSSRTPWL SRCSGSIANG SLNDECLERT SSLGRNIRAD
301: FAKPPFFIYA SLVDISKDSW NTLSSFLFNV QPEYLNSQSF SALTRREGYI HNLPTEGRHV TVPRSPMTIR DALPLTRQFC PFWDTRKWID GVGLDVAGNE
401: QIRDKLEKAM KDSRGIPSEV KQAQIVQQCK TANLVWIGQG KLGPLQPHQM EMILGYPANH TDLPGIDPQD KVASMRFALQ TDTIAYLLSV LKDRYPDGLR
501: VISIYSGIGG AEVALHRLGI PLRCVVSVEE SVVNRRVLKM WWRKTQQNGK LRQLDRIQKL DTKEFEALMK EFGGFDLIVG GNYGLYRGTV MTVGTTMGMD
601: TNRFFEYVRI VQMVRRKMQG IA
101: QMDKPHSLLQ MGFTQQEVSI AIEAFGQEAK VEELADAILA RRIANNIEQK EETAELLPEV MDKPLSLLKM GFNKEEVSSV IAIFGEEATV EELADSIFAR
201: RFSNTTQQKK VRIESEFPDE TETEYSISRL RFYDDYDANI RRKKAKHAFG DDRRASSSQN VNQSSRTPWL SRCSGSIANG SLNDECLERT SSLGRNIRAD
301: FAKPPFFIYA SLVDISKDSW NTLSSFLFNV QPEYLNSQSF SALTRREGYI HNLPTEGRHV TVPRSPMTIR DALPLTRQFC PFWDTRKWID GVGLDVAGNE
401: QIRDKLEKAM KDSRGIPSEV KQAQIVQQCK TANLVWIGQG KLGPLQPHQM EMILGYPANH TDLPGIDPQD KVASMRFALQ TDTIAYLLSV LKDRYPDGLR
501: VISIYSGIGG AEVALHRLGI PLRCVVSVEE SVVNRRVLKM WWRKTQQNGK LRQLDRIQKL DTKEFEALMK EFGGFDLIVG GNYGLYRGTV MTVGTTMGMD
601: TNRFFEYVRI VQMVRRKMQG IA
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.