CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010928_P001	Maize	nucleus	82.77	82.4
Os05t0133900-02	Rice	nucleus	61.59	59.41
HORVU5Hr1G012110.2	Barley	cytosol	57.01	57.89
TraesCS5D01G062400.2	Wheat	cytosol	56.71	57.5
TraesCS5B01G057300.1	Wheat	cytosol	56.1	56.88
TraesCS5A01G051400.2	Wheat	nucleus	55.64	50.98
TraesCS4A01G495700.1	Wheat	cytosol	37.8	49.6
HORVU7Hr1G000410.34	Barley	mitochondrion	41.92	46.45
TraesCS7A01G002900.3	Wheat	plastid	42.99	45.26
TraesCS7D01G003200.1	Wheat	nucleus	41.77	44.05
GSMUA_Achr10P...	Banana	cytosol	23.63	36.38
VIT_05s0020g00450.t01	Wine grape	nucleus	38.87	35.81
KRH50633	Soybean	cytosol	37.2	35.16
KRH02428	Soybean	nucleus	37.65	33.88
OQU93413	Sorghum	nucleus	27.9	30.15
EES00541	Sorghum	nucleus	27.9	30.1
Solyc05g053260.2.1	Tomato	cytosol	25.3	29.59
CDX95858	Canola	cytosol	30.34	28.15
AT3G17310.1	Thale cress	cytosol	30.34	28.03
EER95283	Sorghum	nucleus	24.24	27.6
OQU87185	Sorghum	cytosol	9.6	26.69
CDY13817	Canola	plastid	22.1	26.56
Bra031188.1-P	Field mustard	nucleus	22.1	25.35
CDX82030	Canola	endoplasmic reticulum	21.49	25.09
CDX92125	Canola	plasma membrane, vacuole	30.49	22.62
Bra022208.1-P	Field mustard	plasma membrane, vacuole	30.64	22.43

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	UniProt:A0A1B6P6E5	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	InterPro:IPR030380	EnsemblPlants:KXG21224	ProteinID:KXG21224	ProteinID:KXG21224.1	PFscan:PS51680
PANTHER:PTHR23068	PANTHER:PTHR23068:SF11	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	EnsemblPlantsGene:SORBI_3009G032200	SUPFAM:SSF53335
UniParc:UPI0001C8071B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:2889632..2896841

Molecular Weight (calculated)

73410.4 Da

IEP (calculated)

4.820

GRAVY (calculated)

-0.449

Length

656 amino acids

Sequence
(BLAST)

001: MQVKIEDHAE DGGIDADVRG LGEAAVDPLP GSVHATFKEE EGEPSSSSGK LRSEFIGMGF SSKLVDKVLQ RHGDDDSNTI LESLLSYSDL KQSGSESSGS
101: LGSLFDSDNE ENNSSLESRK VINQDIKPEL DSFSEKWSFL LRTMNFSQQE VDLAFKQLGD EAPLEQLVDF IVNAQSGVSS GGPENGDATN EGKTELLYGV
201: MEKTLSLLQM GFTEEEVSSV LENSDQRATI QELADSILAR RIANSIEQKE VKIESDFLGE AEPDYSSYQP SYSAASYYDD DNNNIRVKRA KHVFIDDTGA
301: SSSHLGNPWS MGTSDMPVKV ELEAMTPGRR ANVQGDLAKP PFFLYGNMVD IPKDTWYQLT QFLYNVEPEF VNSQSFSALT RKEGYIHNLP VEKRRVVVPK
401: SPMTIEEALP FTRQWWPSWD TRKHISVVTI EVGEIEQTCE RLGSMVRESR GVLSEARQMQ IIHQCRVSNL IWVGQNKLGP LEPRQVERIL GYPHNHTNLF
501: ELNQSDRFGA MKFAFQTDTL SYFLSVLKGM YPDGIRVLSI YSGIGGAEVT LHRLGIPLKC VISVEESEVN RKILRRWWSK TEQTGVLRQH PGIWKLKTHV
601: IEDLVKEFGG FDLIIGGNYT SCKGGNTVNT TMGLDSNRFY EYARVVKRVR TAVGLS

Best Arabidopsis Sequence Match ( AT3G17310.2 )
(BLAST)

001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM

Arabidopsis Description

DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.