Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95858 | Canola | cytosol | 68.87 | 69.17 |
| CDX92125 | Canola | plasma membrane, vacuole | 71.13 | 57.13 |
| Bra022208.1-P | Field mustard | plasma membrane, vacuole | 67.75 | 53.68 |
| KRH50633 | Soybean | cytosol | 35.92 | 36.74 |
| VIT_05s0020g00450.t01 | Wine grape | nucleus | 36.76 | 36.66 |
| KRH02428 | Soybean | nucleus | 35.35 | 34.43 |
| TraesCS5D01G062400.2 | Wheat | cytosol | 30.28 | 33.23 |
| TraesCS5B01G057300.1 | Wheat | cytosol | 30.14 | 33.08 |
| HORVU5Hr1G012110.2 | Barley | cytosol | 28.73 | 31.58 |
| Os05t0133900-02 | Rice | nucleus | 30.0 | 31.32 |
| TraesCS4A01G495700.1 | Wheat | cytosol | 21.83 | 31.0 |
| GSMUA_Achr10P... | Banana | cytosol | 18.31 | 30.52 |
| KXG21224 | Sorghum | cytosol | 28.03 | 30.34 |
| TraesCS5A01G051400.2 | Wheat | nucleus | 30.28 | 30.03 |
| Solyc05g053260.2.1 | Tomato | cytosol | 23.38 | 29.59 |
| Zm00001d010928_P001 | Maize | nucleus | 27.18 | 29.29 |
| TraesCS7D01G003200.1 | Wheat | nucleus | 24.93 | 28.46 |
| HORVU7Hr1G000410.34 | Barley | mitochondrion | 23.24 | 27.87 |
| TraesCS7A01G002900.3 | Wheat | plastid | 23.94 | 27.29 |
| AT5G14620.1 | Thale cress | nucleus | 23.52 | 26.68 |
| AT5G15380.1 | Thale cress | cytoskeleton, cytosol, nucleus | 21.55 | 24.52 |
Protein Annotations
| Gene3D:3.40.50.150 | MapMan:35.1 | EntrezGene:820994 | ProteinID:AEE75935.1 | ProteinID:AEE75936.1 | EMBL:AK316724 |
| ArrayExpress:AT3G17310 | EnsemblPlantsGene:AT3G17310 | RefSeq:AT3G17310 | TAIR:AT3G17310 | RefSeq:AT3G17310-TAIR-G | EnsemblPlants:AT3G17310.1 |
| TAIR:AT3G17310.1 | EMBL:AY050882 | EMBL:AY150440 | Unigene:At.5773 | ProteinID:BAB02735.1 | Symbol:DRM3 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0032259 |
| InterPro:IPR030380 | RefSeq:NP_566573.1 | RefSeq:NP_850603.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51680 | PANTHER:PTHR23068 |
| PANTHER:PTHR23068:SF11 | UniProt:Q8H1E8 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF53335 | UniParc:UPI00000ADA91 |
Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
Coordinates
chr3:-:5908934..5913345
Molecular Weight (calculated)
79735.3 Da
IEP (calculated)
4.603
GRAVY (calculated)
-0.496
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.