Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92125 | Canola | plasma membrane, vacuole | 89.96 | 71.95 |
| AT3G17310.1 | Thale cress | cytosol | 69.17 | 68.87 |
| Bra022208.1-P | Field mustard | plasma membrane, vacuole | 86.85 | 68.53 |
| CDX82030 | Canola | endoplasmic reticulum | 33.8 | 42.53 |
| CDY13817 | Canola | plastid | 32.53 | 42.12 |
| KRH50633 | Soybean | cytosol | 36.21 | 36.89 |
| VIT_05s0020g00450.t01 | Wine grape | nucleus | 37.06 | 36.8 |
| KRH02428 | Soybean | nucleus | 35.64 | 34.57 |
| TraesCS5D01G062400.2 | Wheat | cytosol | 30.41 | 33.23 |
| TraesCS5B01G057300.1 | Wheat | cytosol | 30.13 | 32.92 |
| Os05t0133900-02 | Rice | nucleus | 30.98 | 32.21 |
| TraesCS4A01G495700.1 | Wheat | cytosol | 22.49 | 31.8 |
| HORVU5Hr1G012110.2 | Barley | cytosol | 29.0 | 31.73 |
| GSMUA_Achr10P... | Banana | cytosol | 18.53 | 30.75 |
| KXG21224 | Sorghum | cytosol | 28.15 | 30.34 |
| TraesCS5A01G051400.2 | Wheat | nucleus | 30.13 | 29.75 |
| Zm00001d010928_P001 | Maize | nucleus | 27.58 | 29.59 |
| TraesCS7D01G003200.1 | Wheat | nucleus | 25.88 | 29.42 |
| CDY09872 | Canola | nucleus | 22.63 | 28.78 |
| HORVU7Hr1G000410.34 | Barley | mitochondrion | 24.05 | 28.72 |
| Solyc05g053260.2.1 | Tomato | cytosol | 22.77 | 28.7 |
| CDX69571 | Canola | nucleus | 22.49 | 28.6 |
| CDX85589 | Canola | nucleus | 17.96 | 28.54 |
| TraesCS7A01G002900.3 | Wheat | plastid | 24.89 | 28.25 |
| CDX85590 | Canola | cytosol | 22.21 | 28.14 |
| CDX91035 | Canola | cytosol | 22.07 | 28.11 |
| CDY40934 | Canola | nucleus | 16.55 | 27.02 |
| CDY40933 | Canola | cytosol | 22.35 | 24.84 |
| CDX95928 | Canola | golgi | 23.34 | 17.55 |
Protein Annotations
| EnsemblPlants:CDX95858 | EnsemblPlantsGene:GSBRNA2T00101818001 | Gene3D:3.40.50.150 | GO:A0A078E8Y2 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:IPR030380 | InterPro:SAM-dependent_MTases |
| InterPro:SAM_MeTfrase_DRM | KEGG:00270+2.1.1.37 | PANTHER:PTHR23068 | PANTHER:PTHR23068:SF11 | PFscan:PS51680 | ProteinID:CDX95858 |
| ProteinID:CDX95858.1 | SEG:seg | SUPFAM:SSF53335 | UniParc:UPI0004EEB4BA | MapMan:35.1 | : |
Description
BnaC05g36090D
Coordinates
chrLK031891:+:764223..768111
Molecular Weight (calculated)
78882.0 Da
IEP (calculated)
4.623
GRAVY (calculated)
-0.429
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLPDQGNFR RGEGGGGSSG HDRNEHMVFP KPETIDFDLP CDTSYPQQFG DNAASSSGSN VKSLLIEMGF CPTLVQKAID ENGEDDLELL LEILTKSSVT
101: EHPEPSFHGL MEPKPEPDTE YEADGKRMAL LGMKFPENLV DFALDRLGKD AQIDVMVDFI VAAQLAEKFA EESDESLDDT EINEDDEDVI PVASRGPEVP
201: NEVLFETMDK TLHLLEMGFS NHEISIAIEK IGTEGQISDL AETIVTGEAP GLIPNDLEEI EKKVSAAPAA TCLSKSWRFL GVGAEKVDSG RGSSSGTADI
301: KPDPSTDPLP FSTTANVGET SRGKRLKDED DNAFLDEFSD FDDRGKRPRP EYMETPWMQD DKDNTYGFSR AMQPRLSQTL SPDVATRPYF FYGNLSEISP
401: RWCSKISGYL FGIHPEHVDT RLCSALRRTE GYVHNLPVEN RFNILPTPRL TVQDAMPHMK SWWPQWDVRK HLSSVACSDL DYATTLCERL GRRLAECKGK
501: PSQQDQTIIL RHCHTSNLIW IAPNILSPVE PEHLECIMGY PTNHTKIGGA RYAERLKLFE FCFQTDTLGY HLSVLKSLFP EGLTVLSLFS GIGGAEITLN
601: RLGIHLKNVV SVEHCGLSRN ILKRWWQSSG QTGELVQIEA IRSLSTNKLE ALVERFGGFD FVICQNPPIP PDLSKETGSN EARDFDYSLF NEFVRVTKRV
701: IHVMASS
101: EHPEPSFHGL MEPKPEPDTE YEADGKRMAL LGMKFPENLV DFALDRLGKD AQIDVMVDFI VAAQLAEKFA EESDESLDDT EINEDDEDVI PVASRGPEVP
201: NEVLFETMDK TLHLLEMGFS NHEISIAIEK IGTEGQISDL AETIVTGEAP GLIPNDLEEI EKKVSAAPAA TCLSKSWRFL GVGAEKVDSG RGSSSGTADI
301: KPDPSTDPLP FSTTANVGET SRGKRLKDED DNAFLDEFSD FDDRGKRPRP EYMETPWMQD DKDNTYGFSR AMQPRLSQTL SPDVATRPYF FYGNLSEISP
401: RWCSKISGYL FGIHPEHVDT RLCSALRRTE GYVHNLPVEN RFNILPTPRL TVQDAMPHMK SWWPQWDVRK HLSSVACSDL DYATTLCERL GRRLAECKGK
501: PSQQDQTIIL RHCHTSNLIW IAPNILSPVE PEHLECIMGY PTNHTKIGGA RYAERLKLFE FCFQTDTLGY HLSVLKSLFP EGLTVLSLFS GIGGAEITLN
601: RLGIHLKNVV SVEHCGLSRN ILKRWWQSSG QTGELVQIEA IRSLSTNKLE ALVERFGGFD FVICQNPPIP PDLSKETGSN EARDFDYSLF NEFVRVTKRV
701: IHVMASS
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.