Factsheet for HORVU1Hr1G053260.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G038090.3
HORVU5Hr1G057510.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45920.1	HORVU5Hr1G038090.3	AT1G34430.1	21798944
AT2G45920.1	HORVU5Hr1G057510.3	AT2G46550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G221900.1	Wheat	cytosol	71.85	83.38
TraesCS1D01G211200.1	Wheat	cytosol	82.47	82.67
TraesCS1A01G207900.1	Wheat	cytosol	82.47	79.71
HORVU1Hr1G053230.7	Barley	cytosol	33.09	56.3
Os10t0552400-01	Rice	cytosol	48.15	45.24
Zm00001d029847_P001	Maize	cytosol	47.41	37.65
OQU92181	Sorghum	endoplasmic reticulum	48.64	34.14
Bra007601.1-P	Field mustard	cytosol	13.83	31.46
Bra014438.1-P	Field mustard	cytosol	17.28	25.18
CDX89114	Canola	cytosol	17.53	24.91
CDY37075	Canola	cytosol	16.05	24.44
CDY27349	Canola	cytosol	16.05	24.44
Bra039304.1-P	Field mustard	cytosol	16.05	24.44
CDY48922	Canola	cytosol	17.04	23.71
CDX74775	Canola	cytosol	16.3	23.24
AT1G01680.1	Thale cress	cytosol	17.53	23.05
Bra004948.1-P	Field mustard	cytosol	16.05	22.89
CDX71740	Canola	cytosol	15.31	22.88
CDY18888	Canola	nucleus	16.05	22.81
Bra033242.1-P	Field mustard	nucleus	14.32	22.22
AT2G45920.1	Thale cress	cytosol	21.73	22.0
CDX90051	Canola	cytosol	16.54	21.82
CDX89113	Canola	cytosol	18.27	21.7
Bra014439.1-P	Field mustard	cytosol	18.27	21.7
CDY42502	Canola	cytosol	14.57	21.61
CDY51567	Canola	nucleus	21.73	21.57
CDX71741	Canola	nucleus	21.48	21.53
Bra003448.1-P	Field mustard	nucleus	22.47	21.46
CDY42501	Canola	cytosol	18.02	21.41
Bra007600.1-P	Field mustard	cytosol	22.96	21.23
CDY48923	Canola	cytosol	22.72	21.0
AT3G61390.2	Thale cress	cytosol	22.47	20.92
CDY15161	Canola	cytosol	15.8	20.91
AT1G01670.1	Thale cress	nucleus	18.77	20.82
Bra000412.1-P	Field mustard	cytosol	14.32	20.49
CDX83380	Canola	cytosol	14.32	20.49
AT3G61410.3	Thale cress	cytosol	16.54	20.3
CDX95679	Canola	cytosol, extracellular, plastid	6.17	19.38
HORVU5Hr1G077580.3	Barley	plastid	8.64	18.52
Bra033243.1-P	Field mustard	cytosol, plastid	21.98	17.25
Bra033244.1-P	Field mustard	cytosol	21.98	16.67
AT1G01660.2	Thale cress	nucleus	23.21	16.52
CDX90050	Canola	nucleus	22.47	15.99
CDY15162	Canola	nucleus	21.73	15.49
Bra010318.1-P	Field mustard	cytosol	19.51	14.34
VIT_00s0772g00010.t01	Wine grape	cytosol	18.27	11.31
CDX81289	Canola	cytosol	19.26	9.76
CDY54713	Canola	cytosol	18.77	9.52
Bra037819.1-P	Field mustard	cytosol	18.77	9.52
KRH39466	Soybean	cytosol	18.77	9.5
KRH74477	Soybean	cytosol	18.77	9.49
Bra024393.1-P	Field mustard	cytosol	18.52	9.4
CDY67215	Canola	cytosol	18.27	9.27
CDY14575	Canola	cytosol	18.27	9.27
KRG99475	Soybean	cytosol	18.02	9.15
AT5G65500.2	Thale cress	cytosol	17.78	9.01
Solyc11g010700.1.1	Tomato	cytosol	14.57	7.39
PGSC0003DMT400041610	Potato	cytosol	7.16	5.57

Protein Annotations

EnsemblPlants:HORVU1Hr1G053260.5	EnsemblPlantsGene:HORVU1Hr1G053260	Gene3D:3.40.50.620	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	ncoils:Coil
PANTHER:PTHR27003	PANTHER:PTHR27003:SF52	SEG:seg	UniParc:UPI0002958F94	UniProt:M0V8K7	MapMan:35.1

Description

No Description!

Coordinates

chrchr1H:+:393706530..393709032

Molecular Weight (calculated)

44979.5 Da

IEP (calculated)

5.389

GRAVY (calculated)

-0.403

Length

405 amino acids

Sequence
(BLAST)

001: MEVAVAVEVV EENNRKVFVV VPAERRAGRS TLSWALGHLC GGATTVVVTH VHVQPQMIPV MGAKFHASKL SSEQVSSFRR MERDKADRML DDYVHQCRKT
101: KVRCEKLVVE KEDVASGLVE LIGLRGITEL VVSAAADRQY STKLDRPVCR TAAAIMQRAD PSCKIWFVCK EQLICTRETK VQIAPSAVTA PLLPNPSREV
201: LHLSTHQEED DDDIEVELGF YDELREACRA AEDLMNRALN ESHRRQKADE EVASCLQKAK EHEELYLAEV KKREELEAAL ARAEKEISEL RQASQQNTTE
301: EATATISALG LQSTTKEEPE AAPWHCQCQC QSKLAASSPS SVIPWSPRAD EDGLTCEAGV VGCCWLDGMP SPEGVAQPLA RPSFGLRAAV QEYMRQQSQQ
401: RCPFP

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.