Factsheet for Bra004948.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74775	Canola	cytosol	98.94	98.94
Bra039304.1-P	Field mustard	cytosol	72.54	77.44
Bra007601.1-P	Field mustard	cytosol	37.32	59.55
Bra014438.1-P	Field mustard	cytosol	45.77	46.76
HORVU1Hr1G053230.7	Barley	cytosol	21.13	25.21
Bra014439.1-P	Field mustard	cytosol	28.87	24.05
Bra000412.1-P	Field mustard	cytosol	23.94	24.03
TraesCS1A01G207800.1	Wheat	cytosol	23.59	23.26
TraesCS1B01G221500.1	Wheat	cytosol	24.3	23.15
HORVU5Hr1G077580.3	Barley	plastid	15.14	22.75
Bra003448.1-P	Field mustard	nucleus	33.45	22.41
TraesCS1D01G211100.1	Wheat	cytosol	23.59	21.97
Bra033242.1-P	Field mustard	nucleus	19.37	21.07
TraesCS6D01G319000.1	Wheat	cytosol	22.54	20.71
Bra007600.1-P	Field mustard	cytosol	30.99	20.09
TraesCS1B01G221900.1	Wheat	cytosol	23.59	19.2
TraesCS1A01G207900.1	Wheat	cytosol	26.06	17.66
TraesCS1D01G211200.1	Wheat	cytosol	24.3	17.08
Os10t0552400-01	Rice	cytosol	25.7	16.94
HORVU1Hr1G053260.5	Barley	cytosol	22.89	16.05
Os10t0548850-00	Rice	cytosol	21.13	14.81
Zm00001d029847_P001	Maize	cytosol	24.65	13.73
Bra033243.1-P	Field mustard	cytosol, plastid	23.59	12.98
Bra010318.1-P	Field mustard	cytosol	23.59	12.16
OQU92181	Sorghum	endoplasmic reticulum	24.3	11.96
Bra033244.1-P	Field mustard	cytosol	21.83	11.61
Bra024393.1-P	Field mustard	cytosol	23.59	8.4
Bra037819.1-P	Field mustard	cytosol	22.89	8.15
Bra037092.1-P	Field mustard	cytosol	9.51	5.44

Protein Annotations

EnsemblPlants:Bra004948.1	EnsemblPlants:Bra004948.1-P	EnsemblPlantsGene:Bra004948	Gene3D:3.40.50.620	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold
PANTHER:PTHR31964	PANTHER:PTHR31964:SF43	SEG:seg	UniParc:UPI00025480D6	UniProt:M4CL62	MapMan:35.1

Description

AT3G61410 (E=1e-071) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: protein kinase family protein / U-box domain-containing protein (TAIR:AT2G45910.1); Has 146 Blast hits to 144 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

Coordinates

chrA05:+:2607398..2608674

Molecular Weight (calculated)

31995.4 Da

IEP (calculated)

6.783

GRAVY (calculated)

-0.324

Length

284 amino acids

Sequence
(BLAST)

001: MEEEAASNNQ ILDEKIYVAV GINVWKNISN LLWALKNSQG NRICILHIHH PSPTIPLLGT RFEASTVDEE SLRAYREKEK AKIDKILQKY LSICLYKGVQ
101: AEKLCIEMDS IGKGIVETIY QHRIRKFVMG AAADKHYSMK MEDLKSKKAN FVCEQAPATC QIHFTCKGNL IHTREARVDE VRALSVLLSE FQRLVLPQLS
201: SGSLEEAASL NGQSNRSSMD IISSDTLSNT GRAEVTISQD QEEPDDSSSQ IFPCRGMRLD VIGFLIKSAM LWQKLTIQNH DHSE

Best Arabidopsis Sequence Match ( AT3G61410.1 )
(BLAST)

001: MEEKEEAGVM DERIYVALGR EIANNKSNLA WVLDNCQGNK ICIVLVHRPP QMIPVLGTKF DAATVDEELV RAYREKQKAK TDKILDEYLR ICLRKGVQAE
101: KLCVEMNSIE KGIVQMISEN KVRKFIMGAA SDKHFSTKME DLRSKKAIFV CQQASATCHI RFTCKGYLIH TREARMDEVR ALSALLSDFQ RLVTSQSSAN
201: LDQDSGGSKR KSEHEEGEEE ERTSRTSSSR SASTLSYFGG SEASSSVSVM EEISNRSSPP SLPCSGMGLG MITFLINSTK LWQRLAIQNH KHCE

Arabidopsis Description

U-box kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.