Factsheet for Bra039304.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37075	Canola	cytosol	100.0	100.0
Bra004948.1-P	Field mustard	cytosol	77.44	72.54
Bra007601.1-P	Field mustard	cytosol	42.48	63.48
Bra014438.1-P	Field mustard	cytosol	51.13	48.92
HORVU1Hr1G053230.7	Barley	cytosol	23.68	26.47
TraesCS1B01G221500.1	Wheat	cytosol	26.32	23.49
TraesCS1D01G211100.1	Wheat	cytosol	26.69	23.28
Bra000412.1-P	Field mustard	cytosol	24.06	22.61
TraesCS1A01G207800.1	Wheat	cytosol	24.44	22.57
HORVU5Hr1G077580.3	Barley	plastid	15.41	21.69
Bra014439.1-P	Field mustard	cytosol	26.69	20.82
TraesCS6D01G319000.1	Wheat	cytosol	24.06	20.71
Bra033242.1-P	Field mustard	nucleus	19.92	20.31
Bra003448.1-P	Field mustard	nucleus	31.2	19.58
Bra007600.1-P	Field mustard	cytosol	31.58	19.18
TraesCS1B01G221900.1	Wheat	cytosol	24.44	18.62
TraesCS1A01G207900.1	Wheat	cytosol	26.32	16.71
TraesCS1D01G211200.1	Wheat	cytosol	24.81	16.34
Os10t0552400-01	Rice	cytosol	26.32	16.24
HORVU1Hr1G053260.5	Barley	cytosol	24.44	16.05
Os10t0548850-00	Rice	cytosol	22.93	15.06
Zm00001d029847_P001	Maize	cytosol	28.2	14.71
Bra033243.1-P	Field mustard	cytosol, plastid	26.69	13.76
OQU92181	Sorghum	endoplasmic reticulum	26.69	12.3
Bra010318.1-P	Field mustard	cytosol	22.93	11.07
Bra033244.1-P	Field mustard	cytosol	22.18	11.05
Bra024393.1-P	Field mustard	cytosol	24.81	8.27
Bra037819.1-P	Field mustard	cytosol	24.06	8.02
Bra037092.1-P	Field mustard	cytosol	9.77	5.24

Protein Annotations

EnsemblPlants:Bra039304.1	EnsemblPlants:Bra039304.1-P	EnsemblPlantsGene:Bra039304	Gene3D:3.40.50.620	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold
PANTHER:PTHR31964	PANTHER:PTHR31964:SF43	UniParc:UPI0002544459	UniProt:M4FDY3	MapMan:35.1	:

Description

AT3G61410 (E=4e-075) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: protein kinase family protein / U-box domain-containing protein (TAIR:AT2G45910.1); Has 146 Blast hits to 144 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

Coordinates

chrA04:+:18680442..18681691

Molecular Weight (calculated)

30116.3 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.295

Length

266 amino acids

Sequence
(BLAST)

001: MEEEAAATSQ ILEEKLYVAV GREVWKNISN LMWALQNSQG KKICILHIHQ PSPTIPVLGT RFEASTVDEE SVRAYRGKET AKTDKILQEY LSICLKKGVQ
101: AEKLCVEMDS IEKGIVEVIY QHRIRKFVMG AAADKHYSIK MEDLKSKKAN FVCQQAPATC QIHFTCKGNL IHTREARVDE VRALSVLLSD FQRLVLPQIR
201: SDEQNNTSSM DIISSEVLLS DIQEEPNDSS SLAFPCSGMG LNMMNFLINS TKLWQKLTIQ NHEHCE

Best Arabidopsis Sequence Match ( AT3G61410.1 )
(BLAST)

001: MEEKEEAGVM DERIYVALGR EIANNKSNLA WVLDNCQGNK ICIVLVHRPP QMIPVLGTKF DAATVDEELV RAYREKQKAK TDKILDEYLR ICLRKGVQAE
101: KLCVEMNSIE KGIVQMISEN KVRKFIMGAA SDKHFSTKME DLRSKKAIFV CQQASATCHI RFTCKGYLIH TREARMDEVR ALSALLSDFQ RLVTSQSSAN
201: LDQDSGGSKR KSEHEEGEEE ERTSRTSSSR SASTLSYFGG SEASSSVSVM EEISNRSSPP SLPCSGMGLG MITFLINSTK LWQRLAIQNH KHCE

Arabidopsis Description

U-box kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.