Factsheet for VIT_00s0772g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74477	Soybean	cytosol	49.24	40.2
KRH39466	Soybean	cytosol	48.62	39.75
CDY54713	Canola	cytosol	44.8	36.72
Bra037819.1-P	Field mustard	cytosol	44.5	36.47
CDX81289	Canola	cytosol	44.34	36.3
AT5G65500.2	Thale cress	cytosol	44.34	36.3
Solyc11g010700.1.1	Tomato	cytosol	44.19	36.22
CDY67215	Canola	cytosol	43.43	35.59
Bra024393.1-P	Field mustard	cytosol	43.27	35.46
CDY14575	Canola	cytosol	43.12	35.34
PGSC0003DMT400041610	Potato	cytosol	25.99	32.63
KRG99475	Soybean	cytosol	38.38	31.45
HORVU1Hr1G053230.7	Barley	cytosol	8.41	23.11
TraesCS1A01G207800.1	Wheat	cytosol	9.94	22.57
TraesCS1B01G221500.1	Wheat	cytosol	10.24	22.48
TraesCS1D01G211100.1	Wheat	cytosol	9.94	21.31
HORVU5Hr1G077580.3	Barley	plastid	6.12	21.16
TraesCS1B01G221900.1	Wheat	cytosol	10.86	20.34
TraesCS1D01G211200.1	Wheat	cytosol	12.08	19.55
TraesCS1A01G207900.1	Wheat	cytosol	11.77	18.38
HORVU1Hr1G053260.5	Barley	cytosol	11.31	18.27
Os10t0548850-00	Rice	cytosol	11.16	18.02
Os10t0552400-01	Rice	cytosol	11.62	17.63
TraesCS6D01G319000.1	Wheat	cytosol	8.26	17.48
Zm00001d029847_P001	Maize	cytosol	12.69	16.27
OQU92181	Sorghum	endoplasmic reticulum	12.84	14.56

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CCB45320	ProteinID:CCB45320.1	ncoils:Coil
UniProt:F6GZD4	EMBL:FN595025	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF81	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	TIGR:TC64340	UniParc:UPI0002108C7B	ArrayExpress:VIT_00s0772g00010	EnsemblPlantsGene:VIT_00s0772g00010	EnsemblPlants:VIT_00s0772g00010.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:35234185..35237109

Molecular Weight (calculated)

74601.4 Da

IEP (calculated)

6.873

GRAVY (calculated)

-0.375

Length

654 amino acids

Sequence
(BLAST)

001: MEVQLEKVYV AVGSDLQDGF ATLEWALRKW NSHSTSIVII HATNIISNDF VYTPFGKLPA SSVSDEKLGV LRKYEEDKTN KLLSKYMAFC GKVKAEILKI
101: EKHDEPIHKV IIDLISGVHI TKLVLGMTFL KSSAGRSKSA ISGSFYVHRN KPEFCELFIV CGGKLVFLRE ENDGLMEDDQ GVMVARTRGK PSFKGWFGKM
201: FAESPTSHHT HGSSTSSTIA DSLNSLNQWE NSVDEIENYF QQLLSLNLDE QDCEDENNPT EQEMPENITA FLLQFQSGAE KFGALKIKLE EAHETIQLKR
301: KEAKDHVERH GRAEWAICLS TRRAEELEVH INEEISNRID IRKELDASKE QIYEVRSDVE ESKSRLRSLL ELQTELSKKL QLSSLSRSRV EAQLENVAIA
401: RAEMVREIEE LRRQRDVLQR RIEFCREKEA IGTASRLSEL ICSYREYTPE VIKLATDDFS EHLRMKTGGD LTNVFKGRIN HATVAIKMVN SAKGLSQEAF
501: QIEVKLLNRI RHSHIVAVIG FCSELRCMVF EYMHNGSLRD MLFSSHRNSR RRDCALRWHD RVRIAAEVCS ALAFLHLNEP RPIFHGSLNA SNILLDRNMV
601: AKIHGLRLTP SHEEQDMRSD VRAFGLLVLQ LLTGRNWSGL VEEAMAMDRG ALIQ

Best Arabidopsis Sequence Match ( AT5G65500.2 )
(BLAST)

001: MEETKTHELE VEAESGSRME KVYIAVGNDV QEGYKTIHWA LKKWNNIPIS IVLLHLCNIS QDFVYTPFGK LPASSVSEEK LQVLRKYEDQ KIDKLLSKYI
101: TFCGKLQVKA ELLKVEKQHD SIQVLILDLI SKLRITKLVM GITFMRSSSS WKSKSAISGS FYVYQNKPEF CEFYIICGGK MVSLKNDVNN NNSNIRSWIG
201: KMFHDPGRNL DRSSGNNDDP TASGSSWDKN LQEIENYFQQ LLSLNLAEEE TENVVEEEQE DDDDVALNVL QHMDVAEKLE YVRRKVNEAK LMIDEKSREV
301: KVNAERSNRA EWAISLCNSR IGEFEAWIKE ESERREKLQA TLDSDKECIE EAKNYVEKGK TKLHSLAELQ EVLSSKVKTM MEAKSQAEVE LERVVLQRGE
401: MITEIEKLRS QRDVFNRRIE FCKEREVIGS VSKEEVKCGY REYVAEDIRL ATETYSDRLR LKSGGNWTNV YRGRIKHTTV AVKVIGDSLS DEAFGAKVKL
501: LNEIRHPNLV AIAGFCSQRP KCLLFEYMHN GNLRDNLFTS QRKSRRSKIL KWHDRIRIAH QVCSGLGFLH SVKPKPIVHG RLTPSKILLD RNLVPKITGF
601: GLIMHSDQSD TKPDVMAFGV LLLHLLTGRN WHGLLKAMSM NQTSILRDLD QTAGKWPLEL AKEFGALAVK CSSVNRGGNM DFSTKEIMEE LGKIREKADE
701: FKTKGGYEEA TNSNMDEGDP NDIPSVFMCP ILQEVMKNPH VAADGFSYEL EAIQEWLSMG HDTSPMTNLR LDYQMLTPNH TLRSLIQDWH SKRAAQASS

Arabidopsis Description

U-box domain-containing protein kinase family protein [Source:TAIR;Acc:AT5G65500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.