Factsheet for PGSC0003DMT400041610

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g010700.1.1	Tomato	cytosol	79.27	51.75
KRH74477	Soybean	cytosol	49.71	32.33
KRH39466	Soybean	cytosol	49.14	32.0
AT5G65500.2	Thale cress	cytosol	45.49	29.66
Bra037819.1-P	Field mustard	cytosol	44.34	28.95
CDY54713	Canola	cytosol	44.34	28.95
CDY67215	Canola	cytosol	44.34	28.95
Bra024393.1-P	Field mustard	cytosol	44.15	28.82
CDX81289	Canola	cytosol	44.15	28.79
CDY14575	Canola	cytosol	43.76	28.57
VIT_00s0772g00010.t01	Wine grape	cytosol	32.63	25.99
KRG99475	Soybean	cytosol	39.35	25.69
TraesCS6D01G319000.1	Wheat	cytosol	8.45	14.24
Os10t0552400-01	Rice	cytosol	10.94	13.23
Os10t0548850-00	Rice	cytosol	9.21	11.85
Zm00001d029847_P001	Maize	cytosol	11.52	11.76
OQU92181	Sorghum	endoplasmic reticulum	10.94	9.88
TraesCS1D01G211200.1	Wheat	cytosol	7.1	9.16
TraesCS1A01G207900.1	Wheat	cytosol	7.1	8.83
HORVU1Hr1G053260.5	Barley	cytosol	5.57	7.16
TraesCS1B01G221900.1	Wheat	cytosol	3.65	5.44
TraesCS1D01G211100.1	Wheat	cytosol	2.69	4.59
TraesCS1A01G207800.1	Wheat	cytosol	2.3	4.17
TraesCS1B01G221500.1	Wheat	cytosol	2.11	3.69
HORVU1Hr1G053230.7	Barley	cytosol	1.34	2.94
HORVU5Hr1G077580.3	Barley	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.30.40.10	MapMan:50.2.7	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004713	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0018108	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR003613	InterPro:IPR013083	InterPro:Kinase-like_dom_sf	UniProt:M1BBM0	PFAM:PF04564	PFAM:PF07714
EnsemblPlantsGene:PGSC0003DMG400016129	PGSC:PGSC0003DMG400016129	EnsemblPlants:PGSC0003DMT400041610	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003
PANTHER:PTHR27003:SF81	InterPro:Prot_kinase_dom	SMART:SM00219	SMART:SM00504	SUPFAM:SSF56112	SUPFAM:SSF57850
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_cat_dom	UniParc:UPI000296612A	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016129]

Coordinates

chr11:+:2230687..2233629

Molecular Weight (calculated)

59370.8 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.400

Length

521 amino acids

Sequence
(BLAST)

001: MQEKKEALRI KILEIKEAIQ LSREEAKSHV EGQAKAQWAI TLCTRRAEEI DGCINDELAR KPDLKRELDA TKDELNELHT EVEVTKSKLS SILELQHEVS
101: TKMQLSSVAR SRAEVQLEKV LKQRMDTVKE IEEFRGQRDV LRRRITFCRE KDAIGNASML IEPRLKYKEF SAAEIRTATD GFSNLMRLKS GGDWTDVYKA
201: KLHHTSVAIK LYSSADVDSE DTFLAKVKFL SHMRHPHMLS MIGYCSELRC IVFEYMNNGC LRDILFSGTR GSKRRNYGLN WQARICIVAN VCTGLCFLHR
301: AKPRPVAHGN LNPSKILLDC NNIAKIYDVR MPLSCDKSDL RSDIRAYGNL VLQILTGRNW AGLVEEAIMM DQSKLIEVLD PMAGEWPLDI ALELGRIGIK
401: CLSIHEDKEL NMTNLAREME KVKKLADEIV ANGECVVANG RNLDDHEDST EFPNFFLCPI LQEVMKNPHV AADGFSYELE AIEEWLKNGR DTSPMTNLRL
501: KGNLLTPNHS LRALIQDSQK R

Best Arabidopsis Sequence Match ( AT5G65500.2 )
(BLAST)

001: MEETKTHELE VEAESGSRME KVYIAVGNDV QEGYKTIHWA LKKWNNIPIS IVLLHLCNIS QDFVYTPFGK LPASSVSEEK LQVLRKYEDQ KIDKLLSKYI
101: TFCGKLQVKA ELLKVEKQHD SIQVLILDLI SKLRITKLVM GITFMRSSSS WKSKSAISGS FYVYQNKPEF CEFYIICGGK MVSLKNDVNN NNSNIRSWIG
201: KMFHDPGRNL DRSSGNNDDP TASGSSWDKN LQEIENYFQQ LLSLNLAEEE TENVVEEEQE DDDDVALNVL QHMDVAEKLE YVRRKVNEAK LMIDEKSREV
301: KVNAERSNRA EWAISLCNSR IGEFEAWIKE ESERREKLQA TLDSDKECIE EAKNYVEKGK TKLHSLAELQ EVLSSKVKTM MEAKSQAEVE LERVVLQRGE
401: MITEIEKLRS QRDVFNRRIE FCKEREVIGS VSKEEVKCGY REYVAEDIRL ATETYSDRLR LKSGGNWTNV YRGRIKHTTV AVKVIGDSLS DEAFGAKVKL
501: LNEIRHPNLV AIAGFCSQRP KCLLFEYMHN GNLRDNLFTS QRKSRRSKIL KWHDRIRIAH QVCSGLGFLH SVKPKPIVHG RLTPSKILLD RNLVPKITGF
601: GLIMHSDQSD TKPDVMAFGV LLLHLLTGRN WHGLLKAMSM NQTSILRDLD QTAGKWPLEL AKEFGALAVK CSSVNRGGNM DFSTKEIMEE LGKIREKADE
701: FKTKGGYEEA TNSNMDEGDP NDIPSVFMCP ILQEVMKNPH VAADGFSYEL EAIQEWLSMG HDTSPMTNLR LDYQMLTPNH TLRSLIQDWH SKRAAQASS

Arabidopsis Description

U-box domain-containing protein kinase family protein [Source:TAIR;Acc:AT5G65500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.