Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007600.1-P | Field mustard | cytosol | 96.35 | 96.35 |
| CDX71741 | Canola | nucleus | 79.0 | 85.64 |
| CDX89113 | Canola | cytosol | 52.74 | 67.74 |
| CDY51567 | Canola | nucleus | 63.01 | 67.65 |
| CDY42501 | Canola | cytosol | 51.6 | 66.28 |
| AT3G61390.2 | Thale cress | cytosol | 61.87 | 62.3 |
| CDY58794 | Canola | nucleus | 16.89 | 45.4 |
| CDX83380 | Canola | cytosol | 22.6 | 34.98 |
| CDX89114 | Canola | cytosol | 22.15 | 34.04 |
| CDY15161 | Canola | cytosol | 23.29 | 33.33 |
| CDX90051 | Canola | cytosol | 22.6 | 32.25 |
| TraesCS6D01G319000.1 | Wheat | cytosol | 22.6 | 32.04 |
| CDY27349 | Canola | cytosol | 19.41 | 31.95 |
| CDY37075 | Canola | cytosol | 19.18 | 31.58 |
| CDY18888 | Canola | nucleus | 20.32 | 31.23 |
| CDX74775 | Canola | cytosol | 20.09 | 30.99 |
| CDY42502 | Canola | cytosol | 18.72 | 30.04 |
| CDY48922 | Canola | cytosol | 18.95 | 28.52 |
| CDX95679 | Canola | cytosol, extracellular, plastid | 8.22 | 27.91 |
| CDX71740 | Canola | cytosol | 16.89 | 27.31 |
| CDY15162 | Canola | nucleus | 35.16 | 27.11 |
| CDX90050 | Canola | nucleus | 34.93 | 26.89 |
| TraesCS1A01G207800.1 | Wheat | cytosol | 17.35 | 26.39 |
| Os10t0552400-01 | Rice | cytosol | 25.57 | 25.99 |
| HORVU1Hr1G053230.7 | Barley | cytosol | 13.7 | 25.21 |
| TraesCS1B01G221500.1 | Wheat | cytosol | 17.12 | 25.17 |
| TraesCS1D01G211100.1 | Wheat | cytosol | 17.35 | 24.92 |
| Os10t0548850-00 | Rice | cytosol | 22.83 | 24.69 |
| TraesCS1D01G211200.1 | Wheat | cytosol | 21.69 | 23.51 |
| TraesCS1A01G207900.1 | Wheat | cytosol | 22.37 | 23.39 |
| Zm00001d029847_P001 | Maize | cytosol | 26.94 | 23.14 |
| HORVU1Hr1G053260.5 | Barley | cytosol | 21.0 | 22.72 |
| TraesCS1B01G221900.1 | Wheat | cytosol | 18.04 | 22.64 |
| OQU92181 | Sorghum | endoplasmic reticulum | 26.94 | 20.45 |
| HORVU5Hr1G077580.3 | Barley | plastid | 8.68 | 20.11 |
| CDY08273 | Canola | cytosol | 22.37 | 19.76 |
| CDY26075 | Canola | cytosol | 21.69 | 18.92 |
| CDY54713 | Canola | cytosol | 25.34 | 13.91 |
| CDY67215 | Canola | cytosol | 25.11 | 13.78 |
| CDY14575 | Canola | cytosol | 25.11 | 13.78 |
| CDX81289 | Canola | cytosol | 25.11 | 13.77 |
Protein Annotations
| Gene3D:3.30.40.10 | Gene3D:3.40.50.620 | MapMan:35.1 | GO:A0A078IIJ0 | UniProt:A0A078IIJ0 | EnsemblPlants:CDY48923 |
| ProteinID:CDY48923 | ProteinID:CDY48923.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00092010001 | InterPro:IPR003613 | InterPro:IPR013083 | InterPro:IPR014729 | PFAM:PF04564 |
| PFscan:PS51698 | PANTHER:PTHR27003 | PANTHER:PTHR27003:SF52 | InterPro:Rossmann-like_a/b/a_fold | SMART:SM00504 | SUPFAM:SSF52402 |
| SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EDBF54 | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD | : |
Description
BnaA09g39140DBnaA09g39140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIJ0]
Coordinates
chrLK032801:-:70015..71889
Molecular Weight (calculated)
49964.7 Da
IEP (calculated)
7.144
GRAVY (calculated)
-0.621
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLKIPIQET VKLVGSLRLC GSDRSEPVVV SKTEMVMDEK VYVAVVARDL ESKSSLVWAI QNTRGREFCI VYVHQPMNIS APGEMFHEQK LRLYRKEKEK
101: AHNSLDKYLN ICRQMHVNAE KIYMEMDSVE EGILQLISQR GVKKLVMGAA ADRNYTMSMR DLQSKKAIYI SREAPDTCHI WFTCNGYLIC TREATRRDNL
201: NVEGTSSSSL AQSEINKGTE SVASSSMAKD DVQIQVALIE AATSNRETRL EVSKRKEAER AASDAIKRAK ESENLYLNEL KRRKEIEKSL KEANEEMEKM
301: RSEGEARVAE SNMVITNLQG KYSLSMKVLR RLRDEQEELK REISEVSKLK SKREEEEASP SKDLEPPQYF ICPITQEVME DPYVAADGFT YEGEAIRGWF
401: NRGHETSPMT NKRLPHTSLV PNLALRSAIQ EWLQASSS
101: AHNSLDKYLN ICRQMHVNAE KIYMEMDSVE EGILQLISQR GVKKLVMGAA ADRNYTMSMR DLQSKKAIYI SREAPDTCHI WFTCNGYLIC TREATRRDNL
201: NVEGTSSSSL AQSEINKGTE SVASSSMAKD DVQIQVALIE AATSNRETRL EVSKRKEAER AASDAIKRAK ESENLYLNEL KRRKEIEKSL KEANEEMEKM
301: RSEGEARVAE SNMVITNLQG KYSLSMKVLR RLRDEQEELK REISEVSKLK SKREEEEASP SKDLEPPQYF ICPITQEVME DPYVAADGFT YEGEAIRGWF
401: NRGHETSPMT NKRLPHTSLV PNLALRSAIQ EWLQASSS
001: MTLKIPIQEM VKMVGSLRSH GIDIPESMEI NKKEKIYVAV TEKDLESKSS LVWAIQNSGG KEFCIVHVHQ PIPGEMFHEQ KLRLYRKEKD KAHKNSEKYL
101: QICRQMQVTA EIIYIETDSV EKGILQLISQ RGVTKLVMGA AADRHYSMRM RDLKSKKAIY IHREAPATCL IWFTCNGYLI CSREARRANN LYLECASSNS
201: LSQSDITRGT ESIVKDDDHL IKLAVTEAEA SKRKARFEAC KREEAEKTAV DALKKAKQWE NVYFEELKQR KETEKALRKR NDELEKMRSE SETQITESYT
301: VIRKLQEKNN LSMETFRGIR EEQEELKIKL REVSKLKGKR EEEEASTSNH REPPQYFICP ITHDIMEDPH VAADGFTYEG EAISRWFERG HETSPMINKR
401: LPHTSLVPNL ALRSAIQEWL QLRELLNRPS ACREI
101: QICRQMQVTA EIIYIETDSV EKGILQLISQ RGVTKLVMGA AADRHYSMRM RDLKSKKAIY IHREAPATCL IWFTCNGYLI CSREARRANN LYLECASSNS
201: LSQSDITRGT ESIVKDDDHL IKLAVTEAEA SKRKARFEAC KREEAEKTAV DALKKAKQWE NVYFEELKQR KETEKALRKR NDELEKMRSE SETQITESYT
301: VIRKLQEKNN LSMETFRGIR EEQEELKIKL REVSKLKGKR EEEEASTSNH REPPQYFICP ITHDIMEDPH VAADGFTYEG EAISRWFERG HETSPMINKR
401: LPHTSLVPNL ALRSAIQEWL QLRELLNRPS ACREI
Arabidopsis Description
PUB36U-box domain-containing protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ84]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.