Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G276600.1 | Wheat | nucleus | 96.86 | 96.74 |
| HORVU0Hr1G021800.1 | Barley | nucleus | 86.94 | 88.22 |
| TraesCS7A01G351500.1 | Wheat | nucleus | 83.19 | 83.6 |
| Os06t0524300-01 | Rice | nucleus | 66.87 | 68.19 |
| EER88427 | Sorghum | nucleus | 58.65 | 60.93 |
| Zm00001d046072_P001 | Maize | cytosol | 57.92 | 59.36 |
| TraesCS7D01G343700.1 | Wheat | cytosol | 52.96 | 51.59 |
| Bra037384.1-P | Field mustard | nucleus | 12.94 | 46.72 |
| KRG99688 | Soybean | cytosol | 3.51 | 42.65 |
| GSMUA_Achr10P... | Banana | nucleus | 38.69 | 40.82 |
| GSMUA_Achr10P... | Banana | cytosol | 36.28 | 38.66 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 35.19 | 38.39 |
| GSMUA_Achr10P... | Banana | nucleus | 34.7 | 38.22 |
| CDX79176 | Canola | cytosol | 4.96 | 36.28 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 33.13 | 32.27 |
| CDY42041 | Canola | cytosol | 24.3 | 31.11 |
| CDY11374 | Canola | cytosol | 27.57 | 30.77 |
| CDX71720 | Canola | cytosol | 27.45 | 30.68 |
| Bra007625.1-P | Field mustard | cytosol | 27.21 | 30.36 |
| CDX80013 | Canola | nucleus | 24.06 | 29.92 |
| Bra004541.1-P | Field mustard | nucleus | 24.06 | 29.66 |
| CDY48504 | Canola | nucleus | 20.07 | 29.48 |
| AT3G61670.1 | Thale cress | nucleus | 27.93 | 29.24 |
| CDY11373 | Canola | cytosol | 25.63 | 28.92 |
| Bra033264.1-P | Field mustard | nucleus | 19.83 | 28.23 |
| CDY15177 | Canola | nucleus | 18.98 | 28.19 |
| AT2G46380.1 | Thale cress | nucleus | 26.12 | 28.12 |
| CDX90032 | Canola | nucleus | 18.98 | 28.04 |
| CDX91876 | Canola | nucleus | 19.59 | 27.74 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 26.0 | 27.53 |
| KRH06502 | Soybean | nucleus | 29.5 | 27.35 |
| KRH68892 | Soybean | nucleus | 29.87 | 27.32 |
| KRG97141 | Soybean | nucleus | 29.87 | 27.11 |
| Bra000943.1-P | Field mustard | nucleus | 19.59 | 27.0 |
| CDY67475 | Canola | nucleus | 18.98 | 26.57 |
| PGSC0003DMT400032053 | Potato | nucleus | 30.23 | 26.43 |
| Solyc08g082040.2.1 | Tomato | nucleus | 30.11 | 26.35 |
| KRH47938 | Soybean | nucleus | 28.42 | 26.29 |
| CDY07174 | Canola | nucleus | 19.71 | 25.63 |
| AT1G01440.1 | Thale cress | nucleus | 20.19 | 25.15 |
| PGSC0003DMT400000290 | Potato | nucleus | 30.23 | 24.9 |
| Solyc01g095590.2.1 | Tomato | nucleus | 28.54 | 24.41 |
| TraesCS1D01G434200.2 | Wheat | nucleus | 22.01 | 23.27 |
| AT4G01090.1 | Thale cress | nucleus | 20.07 | 23.25 |
| TraesCS3D01G229400.1 | Wheat | nucleus | 20.68 | 21.46 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G371500.1 | EnsemblPlantsGene:TraesCS7D01G371500 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF7 |
| PFAM:PF11331 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:+:480050454..480055331
Molecular Weight (calculated)
91275.5 Da
IEP (calculated)
7.485
GRAVY (calculated)
-0.729
Length
827 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGMEGDEAG AAAAAAARIR VVRCPKCDKF LPELPAYSVY VCGGCGATLQ AKRKNSAQAL DSSDNGNMKY LEVLESVPET SEATMAGASI EYKSVPNRMP
101: PLHSRSVYSR DNSRITRETS TSSVKANIRD DVKEAKYMRF RNVENGENAH PVRARGVSDI RSRSPIDSVP PNAVRGEGPA DHHLKSRNTY SNREHANDTD
201: LDGPSRVRDL EKDRAELLRM LDELRDQVQQ SCEVNGPDTS ATVNRAADAS SSYNIHERSS QFRHDPSQLH RKGTHHSSSM NMRNPSVPHV YGPLPAQQNL
301: HGYVEPIPHA RTSSYPAGPY PWRNFDNYFF GQHDPDPLLS CHHEGFYHQA ACSCSHCYHR EFLPVQGTPL GFSDQRAPYL VNSYGAYPVD GPLLGQQRYN
401: SRGANPSLQQ HNLRANISKK PAQTCEPIAG GAPFTICYNC YEVLQLPNKR SLLGKEYKLR CGSCSHTIVI KLDGTRLDVS ELVPSAHLSP ARQNGIGDNM
501: ADNLRATAED RLLPPYAFSV ASQQSQEKDK HSNSSETDSK HTPLGTNSED SPQSRDLPAE DNVISRTPSL PRRDNCGFSP SEGSGIGSRS TRSEHEKVVL
601: LTETCKQNSI KDVCVANETH STDNEFDDPD YTEDILNVPQ DPGHTRATKV GDSFFTNLIK KSFKMNNGTR NGRARVFVNG FPIPDRAVRK AEKLAGPIYP
701: GDYWYDYRAG FWGVVGQPCL GMIPPYIPEF NYPMPKNCGG GNTGIYINGR ELHQKDLDLL VSRGLSDSPE RSYIVENSGK VTDEASGEEL YGLGKLAPTV
801: EKLRRGFGMR VPKVIVTGQH GTIITHG
101: PLHSRSVYSR DNSRITRETS TSSVKANIRD DVKEAKYMRF RNVENGENAH PVRARGVSDI RSRSPIDSVP PNAVRGEGPA DHHLKSRNTY SNREHANDTD
201: LDGPSRVRDL EKDRAELLRM LDELRDQVQQ SCEVNGPDTS ATVNRAADAS SSYNIHERSS QFRHDPSQLH RKGTHHSSSM NMRNPSVPHV YGPLPAQQNL
301: HGYVEPIPHA RTSSYPAGPY PWRNFDNYFF GQHDPDPLLS CHHEGFYHQA ACSCSHCYHR EFLPVQGTPL GFSDQRAPYL VNSYGAYPVD GPLLGQQRYN
401: SRGANPSLQQ HNLRANISKK PAQTCEPIAG GAPFTICYNC YEVLQLPNKR SLLGKEYKLR CGSCSHTIVI KLDGTRLDVS ELVPSAHLSP ARQNGIGDNM
501: ADNLRATAED RLLPPYAFSV ASQQSQEKDK HSNSSETDSK HTPLGTNSED SPQSRDLPAE DNVISRTPSL PRRDNCGFSP SEGSGIGSRS TRSEHEKVVL
601: LTETCKQNSI KDVCVANETH STDNEFDDPD YTEDILNVPQ DPGHTRATKV GDSFFTNLIK KSFKMNNGTR NGRARVFVNG FPIPDRAVRK AEKLAGPIYP
701: GDYWYDYRAG FWGVVGQPCL GMIPPYIPEF NYPMPKNCGG GNTGIYINGR ELHQKDLDLL VSRGLSDSPE RSYIVENSGK VTDEASGEEL YGLGKLAPTV
801: EKLRRGFGMR VPKVIVTGQH GTIITHG
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.