Factsheet for TraesCS3B01G158300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS2A01G240200.1
TraesCS2A01G282200.1
TraesCS2B01G257800.1
TraesCS2B01G299400.1
TraesCS2D01G237900.1
TraesCS2D01G281000.1
TraesCS7A01G134600.1
TraesCS7B01G035800.1
TraesCS7D01G134000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	TraesCS2A01G282200.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2B01G299400.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2D01G281000.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7A01G134600.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7B01G035800.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS7D01G134000.1	AT3G11590.1	21798944
AT5G58950.1	TraesCS2A01G240200.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS2B01G257800.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS2D01G237900.1	AT3G22960.1	21798944
AT5G58950.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT5G58950.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT5G58950.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G140700.1	Wheat	cytosol	97.5	97.5
TraesCS3A01G313600.1	Wheat	cytosol	96.25	96.25
HORVU3Hr1G026870.1	Barley	cytosol	88.93	86.46
Os01t0201200-01	Rice	nucleus	71.96	71.58
KXG31606	Sorghum	cytosol	68.75	67.31
Zm00001d008875_P001	Maize	cytosol	66.25	66.13
Zm00001d039427_P002	Maize	cytosol	66.43	64.81
KRH10889	Soybean	cytosol	41.96	50.87
KRH21427	Soybean	cytosol	41.43	50.11
KRH50054	Soybean	cytosol, plastid	44.46	50.0
KRH20446	Soybean	cytosol, plastid	43.21	48.99
Solyc03g006400.2.1	Tomato	cytosol	41.79	48.75
GSMUA_Achr9P05820_001	Banana	cytosol	42.86	48.58
PGSC0003DMT400033356	Potato	cytosol, plastid	41.96	48.55
CDX71145	Canola	cytosol, plastid	41.07	48.52
KRH13899	Soybean	cytosol	28.39	48.48
KRH13893	Soybean	cytosol	28.39	48.48
KRH27396	Soybean	cytosol	23.39	48.34
CDY32673	Canola	cytosol	41.43	48.33
CDX88676	Canola	cytosol, plastid	41.07	48.12
CDX80321	Canola	cytosol	40.54	47.79
KRH43461	Soybean	cytosol	27.5	46.95
PGSC0003DMT400076363	Potato	cytosol	42.14	46.83
Bra002606.1-P	Field mustard	cytosol, plastid	41.25	46.76
CDY69707	Canola	cytosol, plastid	41.25	46.76
CDY32674	Canola	cytosol, plastid	40.71	46.72
Solyc02g078140.2.1	Tomato	cytosol	41.96	46.63
Bra006738.1-P	Field mustard	cytosol, plastid	41.79	46.52
CDY02848	Canola	cytosol	39.29	45.74
GSMUA_Achr4P30980_001	Banana	cytosol	46.43	45.06
Bra020343.1-P	Field mustard	cytosol, plastid	41.07	44.92
AT5G58950.1	Thale cress	plastid	41.61	44.38
GSMUA_Achr2P15610_001	Banana	cytosol	45.54	43.44
GSMUA_Achr10P...	Banana	cytosol	43.39	43.32
CDX86103	Canola	cytosol	34.64	41.63
CDX99086	Canola	cytosol, plastid	33.04	41.57
AT3G46930.2	Thale cress	cytosol	37.14	40.39
Bra018183.1-P	Field mustard	cytosol	34.46	39.55
TraesCS6B01G200100.1	Wheat	cytosol	23.04	37.83
TraesCS3B01G307700.2	Wheat	cytosol	40.54	37.77
TraesCS3B01G000400.1	Wheat	cytosol	24.29	36.66
TraesCS1B01G351900.1	Wheat	nucleus	39.11	36.62
TraesCS7B01G290700.1	Wheat	mitochondrion	25.0	35.35
TraesCS6B01G237600.2	Wheat	cytosol	19.82	31.36
TraesCS7B01G182600.1	Wheat	cytosol	23.21	31.25
GSMUA_Achr6P26170_001	Banana	cytosol	41.07	30.83
TraesCS7B01G391300.1	Wheat	cytosol	22.14	29.18
TraesCS6B01G183300.1	Wheat	cytosol	22.14	29.11
TraesCS5B01G481700.1	Wheat	cytosol	19.29	26.02
TraesCS7B01G227400.1	Wheat	cytosol	21.61	22.79
TraesCS2B01G610200.2	Wheat	cytosol	22.5	22.46
TraesCS6B01G096400.1	Wheat	cytosol	22.68	21.97
TraesCS5B01G124400.1	Wheat	cytosol	20.36	21.63
TraesCS5B01G337300.1	Wheat	cytosol	22.86	21.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581
PANTHER:PTHR44581:SF3	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS3B01G158300	EnsemblPlants:TraesCS3B01G158300.1	TIGR:cd13999	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:+:153607165..153609391

Molecular Weight (calculated)

62896.5 Da

IEP (calculated)

10.194

GRAVY (calculated)

-0.561

Length

560 amino acids

Sequence
(BLAST)

001: MDTENSWIRR TKFSHTVYTR VGSHGVHVAP LGRDVEQKLQ RFVSMGKCVT MPIDRGNDET VAALKHTASL PSLRSSLQPN EKKASKQKMS LEIPLSPPAK
101: SEKSKAPRAR SLVKSPSSMM LLSYLNNAHT SQGSNLRQKA NGSHHKLRSK SPLPSVVPSD TFREARASSQ RFTSPPPKRV GSDKSVYGKS LGREGCDMGP
201: SPDWCSTPVV SDKHNSQKDS SWTKRYFDNG GRRRVSAVET VRSRTVSMAQ AVQSTVDWEL DPTKLLVGHR FASGAHSRLY KGLYDDKPVA LKFIRRPKHD
301: TGGIIAAKLD KQYNTEVNAL SHLHHKNVIK LVAAHRVGPV YYIITELLPG GSLRSYLHNP EHHPLPLERT ISIALEIARG LEYIHSQGVV HRDIKPENIL
401: FDDKFEVKIA DFGIACEETL CDLLVDDEGT YRWMAPEMLK RKPYNRKVDV YSFGLLLWEM VTGRIPFENL SPVQVAYAVA NNNKKAMEPE DYCPAVVRPL
501: IEQCCALQPE KRPDFWQIVK TLEKIQSVMS QGGRLDALRS SDHKKGLKHW IQKLKPSHGA

Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)

001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA

Arabidopsis Description

At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.