Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 93.29 | 94.79 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 93.82 | 93.82 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 80.21 | 89.19 |
| EES11990 | Sorghum | nucleus | 64.13 | 63.91 |
| Os04t0382800-00 | Rice | nucleus | 63.6 | 63.05 |
| Zm00001d025208_P002 | Maize | nucleus | 63.43 | 61.26 |
| Zm00001d003996_P001 | Maize | nucleus | 61.31 | 60.98 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 42.4 | 41.45 |
| CDX70996 | Canola | nucleus | 23.14 | 27.58 |
| CDX88802 | Canola | nucleus | 22.79 | 27.56 |
| Bra006620.1-P | Field mustard | nucleus | 21.55 | 27.05 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 31.1 | 26.99 |
| Bra002404.1-P | Field mustard | nucleus | 22.97 | 26.86 |
| Bra001412.1-P | Field mustard | nucleus | 16.43 | 26.8 |
| CDX92367 | Canola | mitochondrion, plastid | 22.61 | 26.67 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 28.98 | 26.58 |
| CDY67997 | Canola | mitochondrion, plastid | 22.08 | 26.54 |
| PGSC0003DMT400067737 | Potato | nucleus | 26.33 | 26.09 |
| Solyc11g068720.1.1 | Tomato | nucleus | 29.15 | 26.03 |
| CDY01038 | Canola | plastid | 27.74 | 25.74 |
| Solyc06g074190.2.1 | Tomato | nucleus | 24.56 | 25.65 |
| AT3G11590.1 | Thale cress | plastid | 28.09 | 25.56 |
| Bra034827.1-P | Field mustard | plastid | 27.56 | 25.41 |
| CDY08511 | Canola | plastid | 27.56 | 25.37 |
| AT5G22310.1 | Thale cress | nucleus | 21.55 | 25.36 |
| PGSC0003DMT400015076 | Potato | nucleus | 24.56 | 24.43 |
| CDX73866 | Canola | cytosol | 15.9 | 24.39 |
| VIT_08s0007g02790.t01 | Wine grape | plastid | 28.27 | 24.32 |
| CDY56601 | Canola | cytosol, golgi, plastid | 15.72 | 24.12 |
| Solyc10g083190.1.1 | Tomato | plastid | 28.09 | 24.05 |
| PGSC0003DMT400072353 | Potato | plastid | 27.74 | 23.97 |
| KRH25284 | Soybean | plastid | 27.56 | 23.67 |
| KRG96225 | Soybean | nucleus | 27.39 | 23.66 |
| KRH67971 | Soybean | plastid | 27.39 | 23.48 |
| KRH30384 | Soybean | plastid | 27.03 | 23.11 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 21.55 | 21.29 |
| TraesCS1D01G317000.1 | Wheat | nucleus, plastid | 21.2 | 18.26 |
| TraesCS2D01G469200.1 | Wheat | plastid | 21.2 | 17.37 |
| TraesCS7D01G288600.1 | Wheat | plastid | 18.02 | 15.86 |
| TraesCS7D01G335400.1 | Wheat | nucleus | 19.08 | 14.52 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G281000.1 | EnsemblPlantsGene:TraesCS2D01G281000 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF18 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:353154330..353161444
Molecular Weight (calculated)
63051.0 Da
IEP (calculated)
7.416
GRAVY (calculated)
-0.866
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGRGGEEGA AVRLARIRKR RALSSSDASN AARRLRSRRP AVLLIRRRRE GGAAMSDSSS RSRHCRRHVA DGASARRLVT AFWQSDKDRL FGEEHPVLLM
101: DKDAAARRSL VPRSNASTEV SKSSRSRTKI KMFEEAGGRK GSCHNGHGQW LSADVMSNCS AMEIGTHPQD DEEKAIQLKD LYNSLIASKE LAKVLAHIWG
201: EVNPSTVSLI SALRSELDLA RAHVRRLIKE HKAERGEIDG LKKELVEEME AWKAKQKEKA ATALQYIVTE LDKEKKSRRR AERAKEKLGA ALADAESSLR
301: AASKELERER KCRGKVEKMC GELVRGIGED RAEVEALKRE AEDAQRELEK EREMLHLADE WREQRVQMKL LEARLQFEEK NSALTQLHDE LQACLDAKKG
401: QAPEKTDQMQ STRASENGGA ASGPVPAPDN AGDGGFSEDC DSEGSDMHSI ELNVDGNGNL HTWSYTPSSR RDQRVGASMH GSLPEDRRMD DAGSRDAGGF
501: DRKTFRETDD ALEGDWADGC SHGVLNFDHD EERYQAIKDL REQMLAGSGL LMSQGRETAQ SQYCIL
101: DKDAAARRSL VPRSNASTEV SKSSRSRTKI KMFEEAGGRK GSCHNGHGQW LSADVMSNCS AMEIGTHPQD DEEKAIQLKD LYNSLIASKE LAKVLAHIWG
201: EVNPSTVSLI SALRSELDLA RAHVRRLIKE HKAERGEIDG LKKELVEEME AWKAKQKEKA ATALQYIVTE LDKEKKSRRR AERAKEKLGA ALADAESSLR
301: AASKELERER KCRGKVEKMC GELVRGIGED RAEVEALKRE AEDAQRELEK EREMLHLADE WREQRVQMKL LEARLQFEEK NSALTQLHDE LQACLDAKKG
401: QAPEKTDQMQ STRASENGGA ASGPVPAPDN AGDGGFSEDC DSEGSDMHSI ELNVDGNGNL HTWSYTPSSR RDQRVGASMH GSLPEDRRMD DAGSRDAGGF
501: DRKTFRETDD ALEGDWADGC SHGVLNFDHD EERYQAIKDL REQMLAGSGL LMSQGRETAQ SQYCIL
001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
Arabidopsis Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.