Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G238900.1 | Wheat | nucleus | 95.56 | 94.8 |
| TraesCS7A01G344200.1 | Wheat | nucleus | 95.16 | 94.4 |
| HORVU7Hr1G080670.9 | Barley | nucleus, plastid | 93.82 | 83.0 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 30.24 | 68.39 |
| OQU76466 | Sorghum | nucleus | 62.23 | 64.94 |
| Zm00001d037050_P001 | Maize | nucleus | 56.72 | 63.75 |
| GSMUA_Achr10P... | Banana | nucleus | 36.42 | 41.12 |
| GSMUA_Achr10P... | Banana | nucleus | 36.56 | 40.36 |
| VIT_15s0046g01530.t01 | Wine grape | mitochondrion | 33.87 | 38.24 |
| KRH27868 | Soybean | nucleus | 30.24 | 33.63 |
| KRH77618 | Soybean | nucleus | 29.57 | 33.03 |
| KRH47994 | Soybean | nucleus | 28.9 | 32.77 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 29.57 | 32.31 |
| KRH06548 | Soybean | nucleus | 28.36 | 32.02 |
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 29.17 | 32.01 |
| PGSC0003DMT400032084 | Potato | nucleus | 28.9 | 31.71 |
| Solyc01g095390.2.1 | Tomato | nucleus | 24.06 | 31.4 |
| PGSC0003DMT400000259 | Potato | nucleus | 27.55 | 31.39 |
| CDY34403 | Canola | nucleus | 24.06 | 31.13 |
| CDY25566 | Canola | nucleus | 23.92 | 30.74 |
| Bra027683.1-P | Field mustard | nucleus | 23.79 | 30.73 |
| KRG97105 | Soybean | nucleus | 26.21 | 30.33 |
| CDY39728 | Canola | nucleus | 24.19 | 30.2 |
| Bra025484.1-P | Field mustard | nucleus | 24.06 | 30.08 |
| CDY44461 | Canola | nucleus | 24.06 | 29.68 |
| AT1G64180.1 | Thale cress | nucleus | 23.39 | 29.34 |
| KRH68854 | Soybean | nucleus | 23.39 | 29.34 |
| AT5G41620.1 | Thale cress | nucleus | 24.33 | 29.05 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 14.52 | 19.08 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 13.98 | 17.96 |
| TraesCS1D01G317000.1 | Wheat | nucleus, plastid | 14.52 | 16.44 |
| TraesCS2D01G469200.1 | Wheat | plastid | 13.98 | 15.05 |
| TraesCS7D01G288600.1 | Wheat | plastid | 12.37 | 14.31 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G335400.1 | EnsemblPlantsGene:TraesCS7D01G335400 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF4 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:426841103..426846452
Molecular Weight (calculated)
83316.6 Da
IEP (calculated)
9.021
GRAVY (calculated)
-0.916
Length
744 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEPPASLL QKCGVGGEQP GHGTANRPRE PQDSAASTAP APLRRELAAA RARRRAGRAT PSPSWKLEAS PPRPEEPPAD AAGRRSSSGA SARQLGATLW
101: EIQDVVRAAG AGRRIRRRAR RGPAASPRRD GDDDDDVDRP HISGGCGRDL SAPLMEHEKL HEDRCHSRQS LSPASYTSSI GAATINLVSP TRSLNFRDRY
201: RDAGCNLKTS TELLKVLNRI WSLEEQHAVD VSAVKGLKSE LQNTQACVQE LTQERQRYHY EIESLARQVS EDKMARKNKE QEKLRATLCS LQEELEAERH
301: LRKHSENLHR KLGKELSAMK PAFLKAVKDL EKEQKATHLL EDLCDEFALG IRNYEEEVRV LKQRHVKEYE HKTDKLVVHI SEAWLDERIQ MQNADARGDS
401: EGKTSITERL SGEIRSFLHG RRSSNFYGAN KHTGNEKGDA SLCRQSLESL HLNGATSAPR LAEDDENSVA SDLHCFELNM HGDAVQTHDL AGTRRTVADC
501: MYSPMRRLEF SDGVSVEGSR ISTARPRSEK GKVKPSSSKA QLHTSTPEIS SRNCDKIDPI DEQNETVMTQ VSRRLHDDLL KIKSEAPQHA FLERKPHDHH
601: PRTYQFRECA ASSDLLHNLH SPARQLKNHQ RASLDYQISE CATAGDVRGL RSPSWQLKNQ RASLDYQISE CATTGDPHNL RSPSRQLKNH HRSSLDHEIS
701: EASPARSLGS KDNTLKAKLL QARLEGQHAR IRASGYPLIS TRRK
101: EIQDVVRAAG AGRRIRRRAR RGPAASPRRD GDDDDDVDRP HISGGCGRDL SAPLMEHEKL HEDRCHSRQS LSPASYTSSI GAATINLVSP TRSLNFRDRY
201: RDAGCNLKTS TELLKVLNRI WSLEEQHAVD VSAVKGLKSE LQNTQACVQE LTQERQRYHY EIESLARQVS EDKMARKNKE QEKLRATLCS LQEELEAERH
301: LRKHSENLHR KLGKELSAMK PAFLKAVKDL EKEQKATHLL EDLCDEFALG IRNYEEEVRV LKQRHVKEYE HKTDKLVVHI SEAWLDERIQ MQNADARGDS
401: EGKTSITERL SGEIRSFLHG RRSSNFYGAN KHTGNEKGDA SLCRQSLESL HLNGATSAPR LAEDDENSVA SDLHCFELNM HGDAVQTHDL AGTRRTVADC
501: MYSPMRRLEF SDGVSVEGSR ISTARPRSEK GKVKPSSSKA QLHTSTPEIS SRNCDKIDPI DEQNETVMTQ VSRRLHDDLL KIKSEAPQHA FLERKPHDHH
601: PRTYQFRECA ASSDLLHNLH SPARQLKNHQ RASLDYQISE CATAGDVRGL RSPSWQLKNQ RASLDYQISE CATTGDPHNL RSPSRQLKNH HRSSLDHEIS
701: EASPARSLGS KDNTLKAKLL QARLEGQHAR IRASGYPLIS TRRK
001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.