Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0260500-00 | Rice | nucleus | 49.85 | 33.0 |
| Zm00001d037050_P001 | Maize | nucleus | 62.01 | 30.82 |
| TraesCS7D01G335400.1 | Wheat | nucleus | 68.39 | 30.24 |
| OQU76466 | Sorghum | nucleus | 65.05 | 30.01 |
| TraesCS7A01G344200.1 | Wheat | nucleus | 67.48 | 29.6 |
| TraesCS7B01G238900.1 | Wheat | nucleus | 66.26 | 29.07 |
| HORVU7Hr1G080670.9 | Barley | nucleus, plastid | 67.17 | 26.28 |
| GSMUA_Achr10P... | Banana | nucleus | 37.08 | 18.1 |
| GSMUA_Achr10P... | Banana | nucleus | 33.13 | 16.54 |
| VIT_15s0046g01530.t01 | Wine grape | mitochondrion | 31.61 | 15.78 |
| Solyc01g095390.2.1 | Tomato | nucleus | 25.84 | 14.91 |
| KRH27868 | Soybean | nucleus | 28.57 | 14.05 |
| KRH77618 | Soybean | nucleus | 27.36 | 13.51 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 27.36 | 13.22 |
| PGSC0003DMT400000259 | Potato | nucleus | 26.14 | 13.17 |
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 26.75 | 12.98 |
| KRH06548 | Soybean | nucleus | 25.84 | 12.9 |
| PGSC0003DMT400032084 | Potato | nucleus | 25.84 | 12.54 |
| KRH47994 | Soybean | nucleus | 24.92 | 12.5 |
| Os05t0498500-01 | Rice | cytosol, nucleus | 5.47 | 12.16 |
| AT1G64180.1 | Thale cress | nucleus | 19.76 | 10.96 |
| CDY44461 | Canola | nucleus | 20.06 | 10.95 |
| CDY39728 | Canola | nucleus | 19.76 | 10.91 |
| AT5G41620.1 | Thale cress | nucleus | 20.36 | 10.75 |
| Bra027683.1-P | Field mustard | nucleus | 18.54 | 10.59 |
| Bra025484.1-P | Field mustard | nucleus | 19.15 | 10.59 |
| CDY25566 | Canola | nucleus | 18.54 | 10.54 |
| CDY34403 | Canola | nucleus | 18.24 | 10.43 |
| KRG97105 | Soybean | nucleus | 20.06 | 10.26 |
| KRH68854 | Soybean | nucleus | 16.72 | 9.27 |
| Os07t0102200-01 | Rice | mitochondrion, nucleus | 13.68 | 8.38 |
| Os08t0190700-00 | Rice | nucleus | 13.98 | 7.76 |
| Os02t0506100-00 | Rice | plastid | 8.81 | 6.65 |
| Os04t0382800-00 | Rice | nucleus | 9.12 | 5.25 |
| Os04t0625000-01 | Rice | nucleus | 10.94 | 5.17 |
Protein Annotations
| EnsemblPlants:Os06t0507900-01 | EnsemblPlantsGene:Os06g0507900 | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF8 | ProteinID:BAS97965.1 | UniParc:UPI000393B58A |
| UniProt:A0A0P0WXE1 | MapMan:35.2 | : | : | : | : |
Description
Conserved hypothetical protein. (Os06t0507900-01)
Coordinates
chr6:-:18116416..18117685
Molecular Weight (calculated)
37220.7 Da
IEP (calculated)
8.239
GRAVY (calculated)
-0.889
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: YEEEVRLLKQ KHIKQYEHKF DKSVVHISEA WLDERMQMQN ADPKATLAER ISITERLSSE IHSFLNTRRS SKPKDDKLYI SNEKQDASLC RQSLESVHLH
101: GATSAPRLAE DDNDNSVASD LHCFELSMHG HTIQNNDLIG TRQRVTSCMY SPMRRLEFSN GIPVEGSRIS TMSPCSMKDK ARPNGIREQL NASTPEISPC
201: NDAKNAPRCA QDETVMTQVS QRLHDDLLKI KSEAPQHAYL GQKSNDHHSR AGQFRDQCTT SGNVYDLCSP ARQLNQRSSL DHEITEASPT HPLEGKSTTL
301: KAKLLQARLE GQHARMRASG YSLTSTRRK
101: GATSAPRLAE DDNDNSVASD LHCFELSMHG HTIQNNDLIG TRQRVTSCMY SPMRRLEFSN GIPVEGSRIS TMSPCSMKDK ARPNGIREQL NASTPEISPC
201: NDAKNAPRCA QDETVMTQVS QRLHDDLLKI KSEAPQHAYL GQKSNDHHSR AGQFRDQCTT SGNVYDLCSP ARQLNQRSSL DHEITEASPT HPLEGKSTTL
301: KAKLLQARLE GQHARMRASG YSLTSTRRK
001: MITVLQVTTY NKAVTPSSSL EFRGRPSREP HYNLKTSTEL LKVLNRIWSL EEQHVSNISL IKALKTEVAH SRVRIKELLR YQQADRHELD SVVKQLAEEK
101: LLSKNKEVER MSSAVQSVRK ALEDERKLRK RSESLHRKMA RELSEVKSSL SNCVKELERG SKSNKMMELL CDEFAKGIKS YEEEIHGLKK KNLDKDWAGR
201: GGGDQLVLHI AESWLDERMQ MRLEGGDTLN GKNRSVLDKL EVEIETFLQE KRNEIPRNRR NSLESVPFNT LSAPPRDVDC EEDSGGSDSN CFELKKPAES
301: YGDETKKPNQ HNKDGSIDEK PKSPSSFQVN FEDQMAWALS SNGKKKTTRA IEDEEEEEDV KPENSNNNKK PENECATTNK NDVMGEMIRT HRRLLSETRE
401: IDEASCNFPS SRRQASPVRQ WISRTVAPDL LGPSEIAIAH GVKDNTLKTK LANSSKSRLR LFKG
101: LLSKNKEVER MSSAVQSVRK ALEDERKLRK RSESLHRKMA RELSEVKSSL SNCVKELERG SKSNKMMELL CDEFAKGIKS YEEEIHGLKK KNLDKDWAGR
201: GGGDQLVLHI AESWLDERMQ MRLEGGDTLN GKNRSVLDKL EVEIETFLQE KRNEIPRNRR NSLESVPFNT LSAPPRDVDC EEDSGGSDSN CFELKKPAES
301: YGDETKKPNQ HNKDGSIDEK PKSPSSFQVN FEDQMAWALS SNGKKKTTRA IEDEEEEEDV KPENSNNNKK PENECATTNK NDVMGEMIRT HRRLLSETRE
401: IDEASCNFPS SRRQASPVRQ WISRTVAPDL LGPSEIAIAH GVKDNTLKTK LANSSKSRLR LFKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.