Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053356_P002 | Maize | nucleus | 66.0 | 51.73 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 33.0 | 49.85 |
| KXG29970 | Sorghum | nucleus | 66.6 | 47.29 |
| GSMUA_Achr10P... | Banana | nucleus | 44.67 | 32.94 |
| GSMUA_Achr10P... | Banana | nucleus | 43.26 | 32.63 |
| VIT_15s0046g01530.t01 | Wine grape | mitochondrion | 39.24 | 29.59 |
| KRH27868 | Soybean | nucleus | 37.83 | 28.1 |
| KRH77618 | Soybean | nucleus | 37.42 | 27.93 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 38.03 | 27.75 |
| PGSC0003DMT400032084 | Potato | nucleus | 36.42 | 26.7 |
| Bra025484.1-P | Field mustard | nucleus | 31.79 | 26.55 |
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 36.22 | 26.55 |
| CDY39728 | Canola | nucleus | 31.79 | 26.51 |
| Solyc01g095390.2.1 | Tomato | nucleus | 30.18 | 26.32 |
| CDY34403 | Canola | nucleus | 29.98 | 25.91 |
| CDY44461 | Canola | nucleus | 31.39 | 25.87 |
| Bra027683.1-P | Field mustard | nucleus | 29.98 | 25.87 |
| KRH47994 | Soybean | nucleus | 34.0 | 25.76 |
| CDY25566 | Canola | nucleus | 29.58 | 25.39 |
| KRH06548 | Soybean | nucleus | 33.6 | 25.34 |
| AT5G41620.1 | Thale cress | nucleus | 31.19 | 24.88 |
| KRG97105 | Soybean | nucleus | 31.19 | 24.11 |
| PGSC0003DMT400000259 | Potato | nucleus | 31.19 | 23.74 |
| AT1G64180.1 | Thale cress | nucleus | 28.17 | 23.61 |
| KRH68854 | Soybean | nucleus | 27.97 | 23.44 |
| Os02t0506100-00 | Rice | plastid | 16.1 | 18.35 |
| Os08t0190700-00 | Rice | nucleus | 18.11 | 15.18 |
| Os04t0382800-00 | Rice | nucleus | 17.1 | 14.89 |
| Os07t0102200-01 | Rice | mitochondrion, nucleus | 15.9 | 14.71 |
| Os04t0625000-01 | Rice | nucleus | 17.5 | 12.5 |
| Os05t0498500-01 | Rice | cytosol, nucleus | 3.42 | 11.49 |
Protein Annotations
| EnsemblPlants:Os02t0260500-00 | EnsemblPlantsGene:Os02g0260500 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF8 | ProteinID:BAS77984.1 |
| SEG:seg | UniParc:UPI000393B1FB | UniProt:A0A0P0VH95 | MapMan:35.1 | : | : |
Description
SKIP interacting protein 7, SKIPa-interacting protein 7, SKIPa-interacting protein 7Hypothetical conserved gene. (Os02t0260500-00)
Coordinates
chr2:+:9066936..9068429
Molecular Weight (calculated)
56504.0 Da
IEP (calculated)
7.282
GRAVY (calculated)
-0.900
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: INQAISPARS LDIKGRFRGA DYNLKTSTEL LKVLNRIWSL EEQHTADMSA INGLKLELQH AQEHIQELKC ERRGYRHDVA SLVRQLSEDK LVRKNKDKEK
101: IAADIHSLQD ELEDERRLRR HSEDLHRKFG KELSEIKSAF VKAVKDLEKE KKTKNLLEDL CDQFAMGIRD YEEEVRALKQ RHVNYEYQFD KSVLHVSEAW
201: LDERMQMQNT DVKEDSLKKS TITERLRSEI EAFLLAKRSV SFKNNDNYMH DSRPNARLRR QSLESVHFNG ATSAPQLAED DDDDSVASDL HCFELNMHGS
301: SIQMHDHTGP RRSYTGNMDA PKRRTEYSHS VVGESSHMSD VQIYSQCNKA RSSSSRPWHA TRTQEIDSQA SARTVPADEQ NEIPCPHISQ GYHNGTTSKN
401: NLGAHADCLG QESLDHYSRA SLFCDGTTSG DLCNPHSPSR QLDYPSASLG HDIGECSTGL LVGMKENTLK AKLLQARLEG RHARLKASGG SVTSRRK
101: IAADIHSLQD ELEDERRLRR HSEDLHRKFG KELSEIKSAF VKAVKDLEKE KKTKNLLEDL CDQFAMGIRD YEEEVRALKQ RHVNYEYQFD KSVLHVSEAW
201: LDERMQMQNT DVKEDSLKKS TITERLRSEI EAFLLAKRSV SFKNNDNYMH DSRPNARLRR QSLESVHFNG ATSAPQLAED DDDDSVASDL HCFELNMHGS
301: SIQMHDHTGP RRSYTGNMDA PKRRTEYSHS VVGESSHMSD VQIYSQCNKA RSSSSRPWHA TRTQEIDSQA SARTVPADEQ NEIPCPHISQ GYHNGTTSKN
401: NLGAHADCLG QESLDHYSRA SLFCDGTTSG DLCNPHSPSR QLDYPSASLG HDIGECSTGL LVGMKENTLK AKLLQARLEG RHARLKASGG SVTSRRK
001: MESKVRGEEE RQKVERLVEK LKVHNNNNNR SSTPAHISFV PNSIVVSSRK LAAAFWEFHQ YHYKDEEDCS YSYLSSASAK MHRGPNGFAG ASSRRQRHGK
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
101: AVAVKENGLD LSQFLRDPSP DHQPDSAGSL RRQIGQMLIK HHQSIDRNNH ALQPVSPASY GSSLEVTTYN KAVTPSSSLE FRGRPSREPH YNLKTSTELL
201: KVLNRIWSLE EQHVSNISLI KALKTEVAHS RVRIKELLRY QQADRHELDS VVKQLAEEKL LSKNKEVERM SSAVQSVRKA LEDERKLRKR SESLHRKMAR
301: ELSEVKSSLS NCVKELERGS KSNKMMELLC DEFAKGIKSY EEEIHGLKKK NLDKDWAGRG GGDQLVLHIA ESWLDERMQM RLEGGDTLNG KNRSVLDKLE
401: VEIETFLQEK RNEIPRNRRN SLESVPFNTL SAPPRDVDCE EDSGGSDSNC FELKKPAESY GDETKKPNQH NKDGSIDEKP KSPSSFQVNF EDQMAWALSS
501: NGKKKTTRAI EDEEEEEDVK PENSNNNKKP ENECATTNKN DVMGEMIRTH RRLLSETREI DEASCNFPSS RRQASPVRQW ISRTVAPDLL GPSEIAIAHG
601: VKDNTLKTKL ANSSKSRLRL FKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.