Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0190700-00 | Rice | nucleus | 35.81 | 8.94 |
| Os04t0625000-01 | Rice | nucleus | 39.19 | 8.33 |
| Os06t0507900-01 | Rice | cytosol, nucleus | 12.16 | 5.47 |
| Os07t0102200-01 | Rice | mitochondrion, nucleus | 13.51 | 3.72 |
| Os02t0506100-00 | Rice | plastid | 10.14 | 3.44 |
| Os02t0260500-00 | Rice | nucleus | 11.49 | 3.42 |
| Os04t0382800-00 | Rice | nucleus | 9.46 | 2.45 |
Protein Annotations
| EnsemblPlants:Os05t0498500-01 | EnsemblPlantsGene:Os05g0498500 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF31 | ProteinID:BAF17864.1 |
| ProteinID:BAS94736.1 | UniParc:UPI0000E12561 | UniProt:Q0DH09 | MapMan:35.2 | : | : |
Description
Conserved hypothetical protein. (Os05t0498500-01)
Coordinates
chr5:-:24540877..24541630
Molecular Weight (calculated)
16092.9 Da
IEP (calculated)
10.148
GRAVY (calculated)
-0.816
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: CGGNDASVSG TDWDDNRSNS EISEVCSTTA EKYRKKGSSF GRLWRSSNGD GHKKTGSELL NGRLSSGRMS NAALSPSLKN GEVCTVSPSV GEWSPDLLNP
101: HVVRAMKGCI EWPRGAQKQN THNLKSKLLE AKLDGHKVQL RQALKQKI
101: HVVRAMKGCI EWPRGAQKQN THNLKSKLLE AKLDGHKVQL RQALKQKI
001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI
Arabidopsis Description
Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.