Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053356_P002 | Maize | nucleus | 82.71 | 91.32 |
| Os02t0260500-00 | Rice | nucleus | 47.29 | 66.6 |
| OQU76466 | Sorghum | nucleus | 50.86 | 49.93 |
| GSMUA_Achr10P... | Banana | nucleus | 36.71 | 39.0 |
| GSMUA_Achr10P... | Banana | nucleus | 37.43 | 38.87 |
| VIT_15s0046g01530.t01 | Wine grape | mitochondrion | 33.86 | 35.96 |
| KRH77618 | Soybean | nucleus | 33.0 | 34.68 |
| KRH27868 | Soybean | nucleus | 32.86 | 34.38 |
| VIT_02s0025g00840.t01 | Wine grape | nucleus | 32.57 | 33.48 |
| Bra027683.1-P | Field mustard | nucleus | 26.29 | 31.94 |
| CDY34403 | Canola | nucleus | 26.14 | 31.83 |
| CDY39728 | Canola | nucleus | 27.0 | 31.71 |
| CDY25566 | Canola | nucleus | 26.14 | 31.61 |
| Bra025484.1-P | Field mustard | nucleus | 26.86 | 31.6 |
| KRH47994 | Soybean | nucleus | 29.29 | 31.25 |
| PGSC0003DMT400000259 | Potato | nucleus | 29.14 | 31.24 |
| Solyc08g081830.2.1 | Tomato | nucleus, plastid | 30.14 | 31.12 |
| PGSC0003DMT400032084 | Potato | nucleus | 30.0 | 30.97 |
| KRH06548 | Soybean | nucleus | 29.14 | 30.96 |
| CDY44461 | Canola | nucleus | 26.57 | 30.85 |
| Solyc01g095390.2.1 | Tomato | nucleus | 25.0 | 30.7 |
| AT1G64180.1 | Thale cress | nucleus | 25.57 | 30.19 |
| AT5G41620.1 | Thale cress | nucleus | 26.43 | 29.7 |
| KRG97105 | Soybean | nucleus | 26.0 | 28.3 |
| KRH68854 | Soybean | nucleus | 23.14 | 27.32 |
| EES11990 | Sorghum | nucleus | 15.57 | 19.19 |
| EES19759 | Sorghum | plastid | 16.71 | 17.52 |
| EES12886 | Sorghum | plastid | 17.0 | 17.2 |
| OQU80028 | Sorghum | plastid | 16.0 | 16.97 |
| KXG30263 | Sorghum | mitochondrion | 14.71 | 16.56 |
| EER97816 | Sorghum | mitochondrion, plastid | 13.71 | 16.13 |
| EES01592 | Sorghum | plastid | 14.71 | 15.24 |
Protein Annotations
| EnsemblPlants:KXG29970 | EnsemblPlantsGene:SORBI_3004G116500 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF8 | ProteinID:KXG29970 |
| ProteinID:KXG29970.1 | SEG:seg | SUPFAM:SSF90257 | UniParc:UPI0007F2B0B7 | UniProt:A0A194YQ69 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr4:+:12201854..12208374
Molecular Weight (calculated)
77182.6 Da
IEP (calculated)
10.093
GRAVY (calculated)
-0.863
Length
700 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVRPGCRHI GMEPSAPAAP PPRGGAERAE AVAAEPAPGP GARVEAQQQT GPEGSRRASR AGREREVPLR LRLGRARRRA GPATPTPSWK MEDEEGVRDR
101: EEGPSALAAA SAAAARRSSA SASARQLGAS LWEIHDVARE VRRSRRRGGR GVATGWEHGG GGGGELDQPQ SSGGIGRHLA DSSMKHHKLN QERSHRIQPF
201: SPASYTSSVG DSNVNQTRSP TRSLGIMGRS MGEGYSLKTS TELLKVLNRI WSLEEQHTAN LSVVNGLKLE LQQAQTHVQE LMQERRRYRH EVSSLMRQLS
301: ENKLARKNKD HVKVDAAVHS LQGELEDEKR LRRHSEDLHR KLGMELSEIK SAFLKSVKDL EKEKKGNRLL EDLCDQFAMG IRNYEEELRV VKQRNVKSYE
401: LNFDNSVLHI SEVWLDERMQ MQNTDVNGEL AHKTTITERL SSEIQAFLLS RKAGSSMNNE KHMNDSTRLR RQSLESVHLN GATSAPQLAE DDDDSIASDL
501: NCFELNMHGH MGSCRSGTGA MDVHKRRSEH PHGIAAEGSR MSSVPVYSQK GIARPSSSKL QHASKVPEIN SQSNARITSA EEQNGSTNTQ IIRGSNNGSM
601: KNNPNAHHVD FLGQESFDHF SRTSLFCEGT TSGDLGNVGS PTRQLKYQST SLDPEITERP PEQPVGVMEN TLKAKLLQAR LEGRHARLKA AGGSSTSRRK
101: EEGPSALAAA SAAAARRSSA SASARQLGAS LWEIHDVARE VRRSRRRGGR GVATGWEHGG GGGGELDQPQ SSGGIGRHLA DSSMKHHKLN QERSHRIQPF
201: SPASYTSSVG DSNVNQTRSP TRSLGIMGRS MGEGYSLKTS TELLKVLNRI WSLEEQHTAN LSVVNGLKLE LQQAQTHVQE LMQERRRYRH EVSSLMRQLS
301: ENKLARKNKD HVKVDAAVHS LQGELEDEKR LRRHSEDLHR KLGMELSEIK SAFLKSVKDL EKEKKGNRLL EDLCDQFAMG IRNYEEELRV VKQRNVKSYE
401: LNFDNSVLHI SEVWLDERMQ MQNTDVNGEL AHKTTITERL SSEIQAFLLS RKAGSSMNNE KHMNDSTRLR RQSLESVHLN GATSAPQLAE DDDDSIASDL
501: NCFELNMHGH MGSCRSGTGA MDVHKRRSEH PHGIAAEGSR MSSVPVYSQK GIARPSSSKL QHASKVPEIN SQSNARITSA EEQNGSTNTQ IIRGSNNGSM
601: KNNPNAHHVD FLGQESFDHF SRTSLFCEGT TSGDLGNVGS PTRQLKYQST SLDPEITERP PEQPVGVMEN TLKAKLLQAR LEGRHARLKA AGGSSTSRRK
001: MVLLSQPDSA GSLRRQIGQM LIKHHQSIDR NNHALQPVSP ASYGSSLEVT TYNKAVTPSS SLEFRGRPSR EPHYNLKTST ELLKVLNRIW SLEEQHVSNI
101: SLIKALKTEV AHSRVRIKEL LRYQQADRHE LDSVVKQLAE EKLLSKNKEV ERMSSAVQSV RKALEDERKL RKRSESLHRK MARELSEVKS SLSNCVKELE
201: RGSKSNKMME LLCDEFAKGI KSYEEEIHGL KKKNLDKDWA GRGGGDQLVL HIAESWLDER MQMRLEGGDT LNGKNRSVLD KLEVEIETFL QEKRNEIPRN
301: RRNSLESVPF NTLSAPPRDV DCEEDSGGSD SNCFELKKPA ESYGDETKKP NQHNKDGSID EKPKSPSSFQ VNFEDQMAWA LSSNGKKKTT RAIEDEEEEE
401: DVKPENSNNN KKPENECATT NKNDVMGEMI RTHRRLLSET REIDEASCNF PSSRRQASPV RQWISRTVAP DLLGPSEIAI AHGVKDNTLK TKLANSSKSR
501: LRLFKG
101: SLIKALKTEV AHSRVRIKEL LRYQQADRHE LDSVVKQLAE EKLLSKNKEV ERMSSAVQSV RKALEDERKL RKRSESLHRK MARELSEVKS SLSNCVKELE
201: RGSKSNKMME LLCDEFAKGI KSYEEEIHGL KKKNLDKDWA GRGGGDQLVL HIAESWLDER MQMRLEGGDT LNGKNRSVLD KLEVEIETFL QEKRNEIPRN
301: RRNSLESVPF NTLSAPPRDV DCEEDSGGSD SNCFELKKPA ESYGDETKKP NQHNKDGSID EKPKSPSSFQ VNFEDQMAWA LSSNGKKKTT RAIEDEEEEE
401: DVKPENSNNN KKPENECATT NKNDVMGEMI RTHRRLLSET REIDEASCNF PSSRRQASPV RQWISRTVAP DLLGPSEIAI AHGVKDNTLK TKLANSSKSR
501: LRLFKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.