CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000005_P002	Maize	plastid	90.76	86.94
Os08t0190700-00	Rice	nucleus	63.03	70.15
EES12886	Sorghum	plastid	64.55	61.56
TraesCS7A01G295000.1	Wheat	plastid	56.21	59.08
TraesCS7B01G197400.1	Wheat	plastid	56.67	58.07
TraesCS7D01G288600.1	Wheat	plastid	56.52	58.01
HORVU7Hr1G065950.7	Barley	vacuole	55.3	55.47
GSMUA_Achr6P00380_001	Banana	nucleus	28.79	44.39
GSMUA_Achr7P00230_001	Banana	nucleus	30.76	41.18
GSMUA_Achr2P03040_001	Banana	nucleus	27.27	39.3
Solyc07g064580.2.1	Tomato	nucleus	39.39	38.63
PGSC0003DMT400057488	Potato	nucleus	39.24	37.43
VIT_19s0090g00370.t01	Wine grape	plastid	40.45	37.24
CDY25414	Canola	mitochondrion	35.3	36.58
Bra035788.1-P	Field mustard	mitochondrion	35.3	36.58
EES19759	Sorghum	plastid	36.97	36.53
Bra018866.1-P	Field mustard	nucleus	36.82	36.11
KRH14411	Soybean	nucleus	37.73	36.09
CDY37111	Canola	nucleus	37.12	36.08
Solyc12g005010.1.1	Tomato	nucleus	36.36	35.77
CDY22812	Canola	nucleus	35.76	35.76
KRH73733	Soybean	nucleus	37.42	35.75
PGSC0003DMT400071667	Potato	nucleus	36.82	35.68
CDY29821	Canola	mitochondrion	34.24	35.37
KRG98777	Soybean	nucleus	37.42	35.34
EES01592	Sorghum	plastid	36.06	35.21
KRH46168	Soybean	nucleus	37.27	35.19
AT3G20350.1	Thale cress	plastid	35.76	35.07
VIT_10s0116g01830.t01	Wine grape	nucleus	38.64	34.6
KRH20862	Soybean	cytosol	14.09	34.57
AT1G50660.1	Thale cress	nucleus	37.27	33.93
KRH11424	Soybean	nucleus, plastid	16.97	29.09
Solyc02g080520.2.1	Tomato	nucleus	27.12	28.28
PGSC0003DMT400042430	Potato	nucleus	26.67	28.03
KRH02074	Soybean	plastid	17.88	27.83
GSMUA_Achr4P23750_001	Banana	cytosol	17.12	27.7
KRH51081	Soybean	plastid	18.64	27.52
EER97816	Sorghum	mitochondrion, plastid	23.64	26.22
KRH36516	Soybean	plastid	21.06	23.8
KRH11499	Soybean	plastid	24.09	23.66
EES11990	Sorghum	nucleus	16.82	19.54
KXG29970	Sorghum	nucleus	16.97	16.0
KXG30263	Sorghum	mitochondrion	14.7	15.59
OQU76466	Sorghum	nucleus	16.21	15.01

Protein Annotations

EnsemblPlants:OQU80028	EnsemblPlantsGene:SORBI_3007G067900	EntrezGene:8071136	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF12
ProteinID:OQU80028	ProteinID:OQU80028.1	RefSeq:XP_002443984.1	SEG:seg	UniParc:UPI0001A8750F	UniProt:A0A1Z5R8F3
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:7556006..7559823

Molecular Weight (calculated)

74277.5 Da

IEP (calculated)

6.567

GRAVY (calculated)

-0.842

Length

660 amino acids

Sequence
(BLAST)

001: MPPASRPASS APPAPPRRLR RRRRRPLKST LPTAPATAAG AARRGGPETP HLRWAAPGGE GNAGAERPRG DPSSSSVRRL AAAVWRLRPP EEAPAAGQRA
101: AASRVGLEHI PRHLQAHLLS KNPLSCHHSL KKDVSSPNSV LEPHSGELHK VHLRLSSGVE GATKWEPINI KSIEPDGAYV IASQLNLVEE QGGSYVASLE
201: LELQQARDRV SKLEAERLSA KKQLDHLFKK LTEEKAAWRN REHKKVRAIL EDMKADLEHE KKNRRQLETI NFKLVDELKE VKMAAKQLLQ EYDNEQKTRE
301: LTEEVCNKLV REIEEHKSEI EALKQDSVKL RGELDEDRKL LQMAEVWREE RVQMKLVDAK LTLEAKYEQL SKLQEDVEAC ISTFSSSKGD STIVEAAHNI
401: VQAIESARDQ EVEFTYEPPR ASEDILAIFE ELRPSEEMET KETEPCLKQE IQEASPTADI FLENRDKLFP DEIHSDESDT EDGSSWETMS HEEMHGSSHS
501: PYGSEPSVNK IFDRISWTSG NDSEGEQTNK LCDDLSNLYL TDMKQSKKKE SAISKLWKSS PLKNCELRTK DVPEMTNARL SSASLPNGVY STTRGSNLDM
601: GDSTPSTAQW SSPDSMNSQL NRGFRGCMEM VQRQSLKAKL LEARMESQKI QLRHVLNQKT

Best Arabidopsis Sequence Match ( AT3G20350.1 )
(BLAST)

001: MKFTGKSNLT ATLPATVPNI RDIHRRRARK PSFTRQRRSG VSVRRLSRPE TPQLKSKVED QNIERCGGVE DGDNEDDDCN KMRCQERSRS VRPDTVRKLA
101: AGVWRLRVPD AVSSGGDKRS KDRLRFQETA GPAGNLGPLF YYHHHDDKHS GFQSNNSRNK HSRFLCKHEP SVPFPHCAME GATKWDPICL DTRDDVHQIY
201: TNVKWNNQQV NDVSLASSIE LKLQEARACI KDLESEKRSQ KKKLEQFLKK VSEERAAWRS REHEKVRAII DDMKADMNQE KKTRQRLEIV NSKLVNELAD
301: SKLAVKRYMH DYQQERKARE LIEEVCDELA KEIEEDKAEI EALKSESMNL REEVDDERRM LQMAEVWREE RVQMKLIDAK VTLEEKYSQM NKLVGDMEAF
401: LSSRNTTGVK EVRVAELLRE TAASVDNIQE IKEFTYEPAK PDDILMLFEQ MNMGENQDRE SEQYVAYSPV SHASKAHTVS PDVNLINKGR HSNAFTDQNG
501: EFEEDDSGWE TVSHSEEHGS SYSPDESIPN ISNTHHRNSN VSMNGTEYEK TLLREIKEVC SVPRRQSKKL PSMAKLWSSL EGMNGRVSNA RKSTVEMVSP
601: ETGSNKGGFN TLDLVGQWSS SPDSANANLN RGGRKGCIEW PRGAHKNSLK TKLIEAQIES QKVQLKHVLE HKI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:B7ZWR9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.