Factsheet for GSMUA_Achr2P03040_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P00380_001	Banana	nucleus	51.09	54.67
GSMUA_Achr7P00230_001	Banana	nucleus	48.25	44.83
GSMUA_Achr8P01540_001	Banana	nucleus	44.98	40.71
KRH20862	Soybean	cytosol	21.83	37.17
TraesCS1B01G329400.1	Wheat	plastid	47.82	33.33
TraesCS1D01G317000.1	Wheat	nucleus, plastid	47.6	33.18
TraesCS1A01G317000.1	Wheat	plastid	47.6	32.98
GSMUA_Achr6P19720_001	Banana	nucleus	49.78	32.52
GSMUA_Achr10P...	Banana	nucleus, plastid	50.0	32.48
EES19759	Sorghum	plastid	47.16	32.34
HORVU1Hr1G066770.1	Barley	mitochondrion, plasma membrane	47.6	32.3
Zm00001d038595_P001	Maize	nucleus, plastid	46.29	31.45
GSMUA_Achr9P30230_001	Banana	nucleus, plastid	48.47	31.14
Zm00001d012593_P001	Maize	plastid	40.61	31.05
Solyc07g064580.2.1	Tomato	nucleus	44.76	30.46
VIT_19s0090g00370.t01	Wine grape	plastid	46.94	29.99
Zm00001d043218_P001	Maize	plastid	43.89	29.87
KRH14411	Soybean	nucleus	44.76	29.71
KRH46168	Soybean	nucleus	45.2	29.61
PGSC0003DMT400057488	Potato	nucleus	44.54	29.48
EES01592	Sorghum	plastid	43.45	29.44
KRH73733	Soybean	nucleus	44.32	29.38
Os08t0190700-00	Rice	nucleus	37.99	29.34
CDY25414	Canola	mitochondrion	40.61	29.2
Bra035788.1-P	Field mustard	mitochondrion	40.61	29.2
PGSC0003DMT400071667	Potato	nucleus	43.23	29.07
Solyc12g005010.1.1	Tomato	nucleus	42.58	29.06
KRG98777	Soybean	nucleus	44.32	29.04
CDY22812	Canola	nucleus	41.7	28.94
Zm00001d026344_P001	Maize	plastid	43.23	28.82
CDY29821	Canola	mitochondrion	40.17	28.8
AT3G20350.1	Thale cress	plastid	42.14	28.68
GSMUA_Achr4P23750_001	Banana	cytosol	25.33	28.43
Bra018866.1-P	Field mustard	nucleus	41.48	28.23
EES12886	Sorghum	plastid	42.58	28.18
AT1G50660.1	Thale cress	nucleus	44.54	28.14
CDY37111	Canola	nucleus	41.7	28.13
Os04t0625000-01	Rice	nucleus	42.36	27.87
Zm00001d002252_P001	Maize	plastid	41.7	27.84
TraesCS2B01G492000.1	Wheat	plastid	41.48	27.74
VIT_10s0116g01830.t01	Wine grape	nucleus	44.1	27.41
TraesCS2D01G469200.1	Wheat	plastid	41.27	27.35
TraesCS2A01G469100.1	Wheat	plastid	41.27	27.27
OQU80028	Sorghum	plastid	39.3	27.27
KRH11424	Soybean	nucleus, plastid	22.27	26.49
Zm00001d000005_P002	Maize	plastid	39.52	26.27
TraesCS7A01G295000.1	Wheat	plastid	34.93	25.48
TraesCS7D01G288600.1	Wheat	plastid	35.59	25.35
KRH02074	Soybean	plastid	22.93	24.76
TraesCS7B01G197400.1	Wheat	plastid	34.72	24.69
HORVU7Hr1G065950.7	Barley	vacuole	35.15	24.47
PGSC0003DMT400042430	Potato	nucleus	33.41	24.36
Solyc02g080520.2.1	Tomato	nucleus	33.62	24.33
KRH51081	Soybean	plastid	22.05	22.6
KRH11499	Soybean	plastid	26.64	18.15
KRH36516	Soybean	plastid	22.93	17.98
GSMUA_Achr6P16290_001	Banana	nucleus	20.09	14.91
GSMUA_Achr10P...	Banana	nucleus	17.47	12.14
GSMUA_Achr10P...	Banana	nucleus	16.81	11.42
GSMUA_Achr6P08260_001	Banana	nucleus	12.88	10.3

Protein Annotations

EnsemblPlants:GSMUA_Achr2P03040_001	EnsemblPlants:GSMUA_Achr2T03040_001	EnsemblPlantsGene:GSMUA_Achr2G03040_001	InterPro:Senescence_reg_S40	ncoils:Coil	PANTHER:PTHR31071
PANTHER:PTHR31071:SF2	PFAM:PF04520	UniParc:UPI00029649DE	UniProt:M0S4P5	MapMan:35.1	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G03040_001]

Coordinates

chr2:+:8761603..8765366

Molecular Weight (calculated)

52151.0 Da

IEP (calculated)

5.256

GRAVY (calculated)

-0.581

Length

458 amino acids

Sequence
(BLAST)

001: MVKAKKWDSR PLNVIEDICQ CYGHLRLLED QQVNGISVMS ALQLELEQAR SYIIELESKQ RSAKKKLNHF LKSLAVEKAS WRNREHEQVR SIIEAVKCNL
101: SKERKNRKWL EVVNAKLVDE LAEVKLLTKR YLLDFEEERK VCELMEEVHD ELAKEIGEGK AEVEALKRES VKLQEAMDEE RRMLQMAEVW REDRVQMKLV
201: DAKLMLEEKY LQLCNLQADM EAFLKVQGGI DKDMAMMKEA EMLKDVLSSI KVEGIEFYYQ PPASGGMSVF EELQPIEETN GRDIGQCYGY SPASHASRIH
301: TVSPETDLFL QNSVNFANGT VNGCSDVEDD SGWETVSQHV GQASCNSPEG SDPSVNCICE ESYGSVRGTY WDEQGDNVKI NSGISEICST TTRQHRKKLS
401: SISRFWRDGG WVPPHEYLAR EKGRSVATSV LEGAGRTLKG RDMSRVRDAV WSRTGFFG

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.