Factsheet for Solyc02g080520.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042430	Potato	nucleus	90.05	90.76
GSMUA_Achr6P00380_001	Banana	nucleus	26.54	39.25
GSMUA_Achr7P00230_001	Banana	nucleus	30.02	38.54
KRH20862	Soybean	cytosol	15.8	37.17
GSMUA_Achr8P01540_001	Banana	nucleus	29.07	36.36
VIT_10s0116g01830.t01	Wine grape	nucleus	41.55	35.69
Solyc07g064580.2.1	Tomato	nucleus	37.28	35.07
KRH02074	Soybean	plastid	22.91	34.2
KRH51081	Soybean	plastid	24.01	34.0
GSMUA_Achr2P03040_001	Banana	nucleus	24.33	33.62
GSMUA_Achr10P...	Banana	nucleus, plastid	36.97	33.19
GSMUA_Achr6P19720_001	Banana	nucleus	36.49	32.95
Solyc12g005010.1.1	Tomato	nucleus	34.12	32.19
Zm00001d026344_P001	Maize	plastid	34.76	32.02
GSMUA_Achr9P30230_001	Banana	nucleus, plastid	35.55	31.56
Zm00001d012593_P001	Maize	plastid	29.86	31.55
EES12886	Sorghum	plastid	34.28	31.36
Zm00001d002252_P001	Maize	plastid	33.49	30.9
KRH11424	Soybean	nucleus, plastid	18.64	30.65
TraesCS1B01G329400.1	Wheat	plastid	31.6	30.44
TraesCS2B01G492000.1	Wheat	plastid	32.86	30.36
Os04t0625000-01	Rice	nucleus	33.33	30.32
TraesCS1D01G317000.1	Wheat	nucleus, plastid	31.44	30.29
TraesCS1A01G317000.1	Wheat	plastid	31.44	30.11
Zm00001d043218_P001	Maize	plastid	31.75	29.87
HORVU1Hr1G066770.1	Barley	mitochondrion, plasma membrane	31.75	29.78
TraesCS2A01G469100.1	Wheat	plastid	32.54	29.73
Zm00001d038595_P001	Maize	nucleus, plastid	31.6	29.67
TraesCS2D01G469200.1	Wheat	plastid	32.39	29.67
EES19759	Sorghum	plastid	31.28	29.64
EES01592	Sorghum	plastid	31.12	29.14
Os08t0190700-00	Rice	nucleus	27.17	29.01
OQU80028	Sorghum	plastid	28.28	27.12
GSMUA_Achr4P23750_001	Banana	cytosol	17.38	26.96
Zm00001d000005_P002	Maize	plastid	28.44	26.12
TraesCS7A01G295000.1	Wheat	plastid	25.75	25.96
TraesCS7D01G288600.1	Wheat	plastid	26.22	25.82
TraesCS7B01G197400.1	Wheat	plastid	26.07	25.62
KRH36516	Soybean	plastid	23.22	25.17
KRH11499	Soybean	plastid	26.22	24.7
HORVU7Hr1G065950.7	Barley	vacuole	25.12	24.16
Solyc06g074190.2.1	Tomato	nucleus	18.8	21.96
Solyc11g068720.1.1	Tomato	nucleus	20.06	20.03
Solyc10g083190.1.1	Tomato	plastid	19.59	18.76
Solyc01g095390.2.1	Tomato	nucleus	14.85	16.49
Solyc08g081830.2.1	Tomato	nucleus, plastid	16.27	15.19

Protein Annotations

EnsemblPlants:Solyc02g080520.2.1	EnsemblPlantsGene:Solyc02g080520.2	ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF2	SEG:seg
UniParc:UPI000276902E	UniProt:K4B9S3	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2:-:44730978..44733633

Molecular Weight (calculated)

71476.0 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.601

Length

633 amino acids

Sequence
(BLAST)

001: MKITDGFASS IDCQLTTDHQ LHHRRKKTRT PVKGGSGSAS ANQFLVSKFN SPSMEMECRG FEFFNGGAKM GVSARKLAAG LWHLAAEFDS AGGGSGGMKR
101: QCGSIHPLPC WIPIPKSVME GATKWDPGHF KTSREVNHSN NLVKLYERQR TATTSLAPAL QLVELIRARI HIQELEADRR RLRKKFKHFA RKLNEERSSW
201: MRKECQKMHA IVDHLKDDLR RERRNSKQLD IVNSKLLVDL ADSKLSSRQY MHDYENERKS RQLLEDVCNE LVKEIEEDRA EIEALKRESA RLEEEVEEER
301: KMLQLAEVWR EERVQMKLID AKLLLEEKYC LMSNLISELQ SFLRANNVTV GMTDLIEVQV VKQVVDSLNI QETKEFCSSS PILNDIYTLN EGSIICEASK
401: LGTNTFADYS TPCRSSAIQI VGTEVSKTCA MTTSSECLNS VIDHDQSCKD ESGRETVTQV EGQFSNYTVG ETEHSVNCTD RGRYLLCGKV NHEQNTGQSG
501: SLDFETSDIS LVLPKKPKKK GSSFRKLWRS SLSTEDFCKT ISVDDSGRFS NGSTSNVDVV FSENVPAERA LAYQDFVNHC CSGGPRNPHT ARAMKGCIEW
601: PRGIPKHGLK SKLLEARIQS QKSQLRSVLK HLN

Best Arabidopsis Sequence Match ( AT1G50660.1 )
(BLAST)

001: MKVTGKPYST ATLPAFESDK NLFSHGPDLR AIQRATTVTK RRARNPSLTR QRRSGPSGGR RSRPETPLLK WKVEDRNKER SGVVEDDDYE DDNHQVARSE
101: TTRRKDRRKI ARPVSVRKLA AGLWRLQVPD ASSSGGERKG KEGLGFQGNG GYMGVPYLYH HSDKPSGGQS NKIRQNPSTI ATTKNGFLCK LEPSMPFPHS
201: AMEGATKWDP VCLDTMEEVH QIYSNMKRID QQVNAVSLVS SLEAELEEAH ARIEDLESEK RSHKKKLEQF LRKVSEERAA WRSREHEKVR AIIDDMKTDM
301: NREKKTRQRL EIVNHKLVNE LADSKLAVKR YMQDYEKERK ARELIEEVCD ELAKEIGEDK AEIEALKRES MSLREEVDDE RRMLQMAEVW REERVQMKLI
401: DAKVALEERY SQMNKLVGDL ESFLRSRDIV TDVKEVREAE LLRETAASVN IQEIKEFTYV PANPDDIYAV FEEMNLGEAH DREMEKSVAY SPISHDSKVH
501: TVSLDANMMN KKGRHSDAYT HQNGDIEEDD SGWETVSHLE EQGSSYSPDG SIPSVNNKNH NHRHSNASSG GTESLGKVWD DTMTPTTEIS EVCSIPRRSS
601: KKVSSIAKLW RSTGASNGDR DSNYKVISME GMNGGRVSNG RKSSAGMVSP DRVSSKGGFS PMMDLVGQWN SSPESANHPH VNRGGMKGCI EWPRGAQKSS
701: LKSKLIEARI ESQKVQLKHV LKQRI

Arabidopsis Description

Actin cytoskeleton-regulatory complex pan-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LPT5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.