Factsheet for Solyc10g083190.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g057200.2.1
Solyc01g067600.2.1
Solyc01g107290.2.1
Solyc02g067920.2.1
Solyc02g085000.2.1
Solyc03g033950.2.1
Solyc03g095610.2.1
Solyc03g122030.1.1
Solyc06g008600.2.1
Solyc06g084040.2.1
Solyc08g067140.1.1
Solyc08g067490.1.1
Solyc08g067570.1.1
Solyc08g067590.1.1
Solyc09g065990.2.1
Solyc09g098390.2.1
Solyc10g078300.1.1
Solyc12g017610.1.1
Solyc12g098990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11590.1	Solyc03g033950.2.1	AT1G31870.1	21798944
AT3G11590.1	Solyc01g107290.2.1	AT1G49850.1	21798944
AT3G11590.1	Solyc03g122030.1.1	AT1G54060.1	21798944
AT3G11590.1	Solyc06g008600.2.1	AT2G30580.1	21798944
AT3G11590.1	Solyc06g084040.2.1	AT2G30580.1	21798944
AT3G11590.1	Solyc09g065990.2.1	AT2G30580.1	21798944
AT3G11590.1	Solyc09g098390.2.1	AT2G43370.1	21798944
AT3G11590.1	Solyc02g067920.2.1	AT3G01690.1	21798944
AT3G11590.1	Solyc01g057200.2.1	AT3G06430.1	21798944
AT3G11590.1	Solyc12g098990.1.1	AT3G06430.1	21798944
AT3G11590.1	Solyc02g085000.2.1	AT3G50910.1	21798944
AT3G11590.1	Solyc10g078300.1.1	AT3G56680.1	21798944
AT3G11590.1	Solyc01g067600.2.1	AT4G15730.1	21798944
AT3G11590.1	Solyc08g067140.1.1	AT4G15730.1	21798944
AT3G11590.1	Solyc08g067490.1.1	AT4G15730.1	21798944
AT3G11590.1	Solyc08g067570.1.1	AT4G15730.1	21798944
AT3G11590.1	Solyc08g067590.1.1	AT4G15730.1	21798944
AT3G11590.1	Solyc12g017610.1.1	AT4G15730.1	21798944
AT3G11590.1	Solyc03g095610.2.1	AT5G05190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072353	Potato	plastid	94.55	95.42
VIT_08s0007g02790.t01	Wine grape	plastid	59.91	60.18
KRG96225	Soybean	nucleus	58.55	59.08
KRH67971	Soybean	plastid	58.09	58.18
CDY08511	Canola	plastid	51.89	55.77
CDY01038	Canola	plastid	51.44	55.74
Bra034827.1-P	Field mustard	plastid	51.74	55.7
AT3G11590.1	Thale cress	plastid	51.59	54.82
Bra001412.1-P	Field mustard	nucleus	27.38	52.16
CDY56601	Canola	cytosol, golgi, plastid	27.23	48.78
CDX73866	Canola	cytosol	27.23	48.78
Solyc11g068720.1.1	Tomato	nucleus	40.39	42.11
Solyc06g074190.2.1	Tomato	nucleus	31.32	38.19
GSMUA_Achr6P16290_001	Banana	nucleus	31.77	34.04
GSMUA_Achr6P08260_001	Banana	nucleus	27.23	31.41
Os02t0506100-00	Rice	plastid	19.52	29.59
HORVU2Hr1G069400.8	Barley	nucleus	22.24	28.88
EES11990	Sorghum	nucleus	24.66	28.7
TraesCS7B01G035800.1	Wheat	nucleus	24.96	28.55
TraesCS2B01G299400.1	Wheat	nucleus, plastid	24.05	28.55
TraesCS7A01G134600.1	Wheat	nucleus	24.96	28.5
Zm00001d003996_P001	Maize	nucleus	24.51	28.47
Os04t0382800-00	Rice	nucleus	24.51	28.37
TraesCS2A01G282200.1	Wheat	nucleus	24.21	28.27
TraesCS7D01G134000.1	Wheat	nucleus	24.66	28.15
TraesCS2D01G281000.1	Wheat	nucleus, plastid	24.05	28.09
Zm00001d025208_P002	Maize	nucleus	24.66	27.82
KXG30263	Sorghum	mitochondrion	24.36	25.88
Zm00001d000402_P001	Maize	mitochondrion	20.73	25.0
Solyc07g064580.2.1	Tomato	nucleus	22.84	22.44
Solyc12g005010.1.1	Tomato	nucleus	22.09	21.76
Solyc08g081830.2.1	Tomato	nucleus, plastid	22.09	21.53
Solyc02g080520.2.1	Tomato	nucleus	18.76	19.59
Solyc01g095390.2.1	Tomato	nucleus	16.64	19.3

Protein Annotations

EnsemblPlants:Solyc10g083190.1.1	EnsemblPlantsGene:Solyc10g083190.1	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020
ncoils:Coil	PANTHER:PTHR31071	PANTHER:PTHR31071:SF7	SEG:seg	UniParc:UPI0002769D9D	UniProt:K4D3A6
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:63052730..63055794

Molecular Weight (calculated)

74099.5 Da

IEP (calculated)

9.768

GRAVY (calculated)

-0.871

Length

661 amino acids

Sequence
(BLAST)

001: MPRQNQAMVE GLIPKIRKRG CSSSSSASSK VYNYRFKRAI LVGKSRNGLG LGLGLGLRGS RSSTPVPSWR ATPLRNVVES PKQSLGGGIS QPVSARKLAA
101: TLWEMNEMPS PRITEEDLEK KKKMMMKKEK IRAGHMSSGS VSGSLPPHLC DPSHSPVSER MDRSGTGSYQ KRSSTTSRRP RTTDHNVGML DSLSSASFME
201: LETRSRAQTP RGSVAGFGSR LKDVSNALTT SKELLKIINR IWAHADQPSS STSLVSALHT ELERARLQVN QLIQDQRSDQ NEINYLLKCF AEEKAAWKNK
301: EQQAVEAAIE SVANELEVER KLRRRFESLN KKLGKELSDS KASFVKAVQE LESEKRAREV MEQVCDELAR DIGEDRAEAE EMKRESAKVQ EELEQEREML
401: QLADRLREER AHVKLSEAKN HFEEKNSAID KLRKQLEGFL GKKKTKGKRN GSLNFRNNED TASLSKEKDD DGEVENVADC AEDSAESDLH SIELNMDNSN
501: KSYNWAYPSN VVRESKRISV DERRARNSIA GQPRRSTPIQ RSISGGVVEY VNQAANLPTS GDGLDRERLH ELEKLGQRYS YLDEAQRLKA VKGLKDHLLA
601: SSGTGSCKDI SSPIRQWEQP WPSRDPCATI QEKSSIIQGM CHKITARRRP KVSEDQDGEI V

Best Arabidopsis Sequence Match ( AT3G11590.1 )
(BLAST)

001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW

Arabidopsis Description

At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.