Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 88.21 | 80.61 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 89.19 | 80.21 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 88.41 | 79.51 |
| Os04t0382800-00 | Rice | nucleus | 64.05 | 57.09 |
| EES11990 | Sorghum | nucleus | 63.65 | 57.04 |
| Zm00001d003996_P001 | Maize | nucleus | 61.69 | 55.18 |
| Zm00001d025208_P002 | Maize | nucleus | 63.26 | 54.95 |
| Bra001412.1-P | Field mustard | nucleus | 18.27 | 26.8 |
| PGSC0003DMT400067737 | Potato | nucleus | 29.08 | 25.92 |
| Solyc06g074190.2.1 | Tomato | nucleus | 26.92 | 25.28 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 30.26 | 24.96 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 31.83 | 24.85 |
| CDX73866 | Canola | cytosol | 17.68 | 24.39 |
| CDY56601 | Canola | cytosol, golgi, plastid | 17.49 | 24.12 |
| CDX70996 | Canola | nucleus | 22.2 | 23.79 |
| CDY01038 | Canola | plastid | 28.49 | 23.77 |
| PGSC0003DMT400015076 | Potato | nucleus | 26.52 | 23.73 |
| Bra006620.1-P | Field mustard | nucleus | 21.02 | 23.73 |
| Solyc11g068720.1.1 | Tomato | nucleus | 29.47 | 23.66 |
| CDX88802 | Canola | nucleus | 21.61 | 23.5 |
| AT3G11590.1 | Thale cress | plastid | 28.68 | 23.47 |
| Bra034827.1-P | Field mustard | plastid | 28.09 | 23.29 |
| CDY08511 | Canola | plastid | 28.09 | 23.25 |
| Bra002404.1-P | Field mustard | nucleus | 21.81 | 22.93 |
| CDX92367 | Canola | mitochondrion, plastid | 21.41 | 22.71 |
| VIT_08s0007g02790.t01 | Wine grape | plastid | 29.27 | 22.64 |
| CDY67997 | Canola | mitochondrion, plastid | 20.83 | 22.51 |
| Solyc10g083190.1.1 | Tomato | plastid | 28.88 | 22.24 |
| PGSC0003DMT400072353 | Potato | plastid | 28.49 | 22.14 |
| KRH67971 | Soybean | plastid | 28.29 | 21.82 |
| KRG96225 | Soybean | nucleus | 27.9 | 21.68 |
| AT5G22310.1 | Thale cress | nucleus | 20.43 | 21.62 |
| KRH25284 | Soybean | plastid | 27.5 | 21.24 |
| KRH30384 | Soybean | plastid | 26.92 | 20.69 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 22.0 | 19.55 |
| HORVU1Hr1G066770.1 | Barley | mitochondrion, plasma membrane | 22.0 | 16.59 |
| HORVU7Hr1G065950.7 | Barley | vacuole | 19.06 | 14.74 |
| HORVU7Hr1G080670.9 | Barley | nucleus, plastid | 20.04 | 12.13 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G069400.8 | EnsemblPlantsGene:HORVU2Hr1G069400 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF18 | SEG:seg |
| UniParc:UPI000B46F348 | UniProt:A0A287IBV0 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:488240037..488243942
Molecular Weight (calculated)
57009.1 Da
IEP (calculated)
5.902
GRAVY (calculated)
-0.894
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MSESSSRSRH CCRHAADGAS ARRLVTAFWQ SDKDRLFGDG EEHHSLLTHK DAVARRSLVP RSNASTEVSK TSRSRTKIFE EAGGRKGSCH NAHGQWLSAD
101: VMSNCSAMEI GTHPQDDVSR CPEEKAIQLK DLYNSLIASK ELAKVLAHIW GEVNPSTVSL ISALRSELDL ARAHVRRLIK EQKSEHSEID VLKKELVEEM
201: ESWKAKQKEK AATALQYIVT ELDNEKKSRR RAERAKEKLG AALADAESSL RAATKELERE RKSRERVEKM CSELVRGIGE DRAEVEVLKR EAEDAQRELE
301: KEREMLHLAD EWREQRVQMK LLEARLQFEE KNSALNQLHD ELQACLDAKK GQEPQKTDQT PSTHASGSVP APDSAGDGGF SEDCDSEGSD MHSIELNVDG
401: NGNLHTWSYT PSSRHDRSVD ASMMHGSFTD DRRADDAGSR GGVDRKTFRE TDDALQGDWA EGCSHGVLNF DHDEERYQAI KDLREQMLAG SGLLVSQGRD
501: TAQSEHCNL
101: VMSNCSAMEI GTHPQDDVSR CPEEKAIQLK DLYNSLIASK ELAKVLAHIW GEVNPSTVSL ISALRSELDL ARAHVRRLIK EQKSEHSEID VLKKELVEEM
201: ESWKAKQKEK AATALQYIVT ELDNEKKSRR RAERAKEKLG AALADAESSL RAATKELERE RKSRERVEKM CSELVRGIGE DRAEVEVLKR EAEDAQRELE
301: KEREMLHLAD EWREQRVQMK LLEARLQFEE KNSALNQLHD ELQACLDAKK GQEPQKTDQT PSTHASGSVP APDSAGDGGF SEDCDSEGSD MHSIELNVDG
401: NGNLHTWSYT PSSRHDRSVD ASMMHGSFTD DRRADDAGSR GGVDRKTFRE TDDALQGDWA EGCSHGVLNF DHDEERYQAI KDLREQMLAG SGLLVSQGRD
501: TAQSEHCNL
001: MEQRKKGCKI RKRGGSSSSS SSLARRNRFK RAIFAGKRAA QDDGGSGTPV KSITAAKTPV LLSFSPENLP IDHHQLQKSC VSARKLAATL WEINDDADPP
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
Arabidopsis Description
AT5g22310/MWD9_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.