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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 4
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G335400.1 Wheat nucleus 83.0 93.82
TraesCS7A01G344200.1 Wheat nucleus 83.0 93.07
TraesCS7B01G238900.1 Wheat nucleus 82.64 92.67
Os06t0507900-01 Rice cytosol, nucleus 26.28 67.17
OQU76466 Sorghum nucleus 55.29 65.22
Zm00001d037050_P001 Maize nucleus 50.3 63.9
GSMUA_Achr10P... Banana nucleus 32.34 41.27
GSMUA_Achr10P... Banana nucleus 31.75 39.61
VIT_15s0046g01530.t01 Wine grape mitochondrion 30.08 38.39
KRH27868 Soybean nucleus 26.75 33.63
KRH47994 Soybean nucleus 25.8 33.08
KRH77618 Soybean nucleus 26.16 33.03
VIT_02s0025g00840.t01 Wine grape nucleus 26.64 32.89
Solyc08g081830.2.1 Tomato nucleus, plastid 26.28 32.6
KRH06548 Soybean nucleus 25.45 32.47
PGSC0003DMT400032084 Potato nucleus 26.04 32.3
Solyc01g095390.2.1 Tomato nucleus 21.4 31.58
PGSC0003DMT400000259 Potato nucleus 24.49 31.55
CDY34403 Canola nucleus 21.28 31.13
Bra027683.1-P Field mustard nucleus 21.05 30.73
CDY25566 Canola nucleus 21.05 30.57
KRG97105 Soybean nucleus 23.31 30.48
Bra025484.1-P Field mustard nucleus 21.4 30.25
CDY39728 Canola nucleus 21.28 30.03
AT1G64180.1 Thale cress nucleus 21.05 29.85
CDY44461 Canola nucleus 21.17 29.52
KRH68854 Soybean nucleus 20.81 29.51
AT5G41620.1 Thale cress nucleus 21.4 28.89
HORVU2Hr1G069400.8 Barley nucleus 12.13 20.04
HORVU1Hr1G066770.1 Barley mitochondrion, plasma membrane 12.72 15.85
HORVU7Hr1G065950.7 Barley vacuole 11.65 14.89
Protein Annotations
EnsemblPlants:HORVU7Hr1G080670.9EnsemblPlantsGene:HORVU7Hr1G080670ncoils:CoilPANTHER:PTHR31071PANTHER:PTHR31071:SF4SEG:seg
UniParc:UPI000B482D8DUniProt:A0A287X263MapMan:35.1:::
Description
No Description!
Coordinates
chrchr7H:-:478781974..478787710
Molecular Weight (calculated)
93860.7 Da
IEP (calculated)
8.988
GRAVY (calculated)
-0.944
Length
841 amino acids
Sequence
(BLAST)
001: MRPQVNISSP LTTAVLRSRP PLFPSHRGGK KKKDTCSLSS SSSTAWDPTP ASTVHRETAQ GSEGEDAGHD GSLVRESKEK QAGEAEAEAE RGRTARQDSE
101: AAAMEVEPPA APLQKCGVGG EQPAHGTPNR QREPEEGAPL RRELAAARAR RRADRATPSP SWKLEASPPR PEEPAADAAA AGRRSSSGAS ARQLGATLWE
201: IQDVIRAAGA GRRIRRRARR GPAASPLHGG DDDVDRPHIS GGCGRDLSAP LMEHEKLHED RCHSRQSLSP ASYTSSIGAA TINLVSPTRS LNFRDRYRDA
301: GCNLKTSTEL LKVLNRIWSL EEQHAVDVST VKGLKLELQN TQARVQELTQ ERQRYHYEIE SLARQVTEDK MARKNKEQEK LRATLRSLQD ELEAERHLRK
401: HSENLHRKLG KELSAMKPAF LKAVKDLEKE QKATRLLEDL CDEFALGIRN YEEEVRVLKQ RHVKEYEHKT DKLVVHISEA WLDERIQMQN ADARGDSEGK
501: TSITERLSGE IQSFLHGRRS SNLYGVNKHT GNEKGDASLC RQSLESLHLN GATSAPQLAE DDENSVASDL HCFELDMHGD AVQTHELAGT RRTVADCMYS
601: PMRRLEFSDG VSVEGSRIST ARPRSEKGKV KPSSSKAQLN TSTPEISSRN CDKIDPIDEQ NETVMTQVSR RLHDDLLKIK SEAPQHAFLE RKPHDHHPRT
701: YQFRECATSS DLLHNLHSPA RQLKNHQRAS LDYQRSECAT TGDLLGLRSP SWQLKNQRAS LDYQMSECAT TGDMHNLRSP SRQQKNHHRS TLDHEISESS
801: PARSLGSKDN TLKAKLLQAR LEGQHARIRA SGYPLISTRR K
Best Arabidopsis Sequence Match ( AT5G41620.4 )
(BLAST)
001: MVLLSQPDSA GSLRRQIGQM LIKHHQSIDR NNHALQPVSP ASYGSSLEVT TYNKAVTPSS SLEFRGRPSR EPHYNLKTST ELLKVLNRIW SLEEQHVSNI
101: SLIKALKTEV AHSRVRIKEL LRYQQADRHE LDSVVKQLAE EKLLSKNKEV ERMSSAVQSV RKALEDERKL RKRSESLHRK MARELSEVKS SLSNCVKELE
201: RGSKSNKMME LLCDEFAKGI KSYEEEIHGL KKKNLDKDWA GRGGGDQLVL HIAESWLDER MQMRLEGGDT LNGKNRSVLD KLEVEIETFL QEKRNEIPRN
301: RRNSLESVPF NTLSAPPRDV DCEEDSGGSD SNCFELKKPA ESYGDETKKP NQHNKDGSID EKPKSPSSFQ VNFEDQMAWA LSSNGKKKTT RAIEDEEEEE
401: DVKPENSNNN KKPENECATT NKNDVMGEMI RTHRRLLSET REIDEASCNF PSSRRQASPV RQWISRTVAP DLLGPSEIAI AHGVKDNTLK TKLANSSKSR
501: LRLFKG
Arabidopsis Description
Uncharacterized protein At5g41620 [Source:UniProtKB/Swiss-Prot;Acc:Q66GQ2]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.