Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G017080.1 | |
| HORVU6Hr1G036020.1 | |
| HORVU7Hr1G000780.1 | |
| HORVU7Hr1G041170.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G552300.1 | Wheat | cytosol | 92.37 | 95.04 |
| TraesCS4A01G333500.1 | Wheat | cytosol | 89.56 | 94.89 |
| TraesCS5D01G538600.1 | Wheat | cytosol | 90.76 | 93.39 |
| TraesCS5B01G552200.1 | Wheat | cytosol | 91.16 | 89.02 |
| HORVU5Hr1G122080.1 | Barley | cytosol | 81.93 | 82.59 |
| EER90511 | Sorghum | cytosol | 69.48 | 69.2 |
| Os03t0850700-01 | Rice | cytosol | 69.48 | 66.28 |
| Zm00001d012847_P001 | Maize | cytosol | 67.87 | 61.23 |
| HORVU5Hr1G121860.2 | Barley | plastid | 73.9 | 54.44 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 53.82 | 50.95 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 50.2 | 50.81 |
| Bra032645.1-P | Field mustard | cytosol | 46.59 | 50.22 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 49.8 | 48.44 |
| CDX90047 | Canola | cytosol | 49.4 | 48.24 |
| Bra033247.1-P | Field mustard | cytosol | 49.4 | 48.24 |
| KRH41051 | Soybean | cytosol | 47.79 | 47.98 |
| AT1G01630.1 | Thale cress | cytosol | 49.0 | 47.84 |
| CDY15164 | Canola | cytosol | 48.59 | 47.45 |
| Solyc03g118150.2.1 | Tomato | cytosol | 49.8 | 45.76 |
| PGSC0003DMT400036745 | Potato | cytosol | 49.4 | 45.39 |
| KRH54081 | Soybean | cytosol | 48.19 | 45.28 |
| CDY38020 | Canola | cytosol | 47.39 | 45.04 |
| KRH63881 | Soybean | cytosol | 47.39 | 44.7 |
| HORVU3Hr1G096280.6 | Barley | plastid | 53.01 | 42.86 |
| Solyc06g068800.2.1 | Tomato | cytosol | 47.79 | 38.51 |
| PGSC0003DMT400065724 | Potato | cytosol | 47.79 | 38.51 |
| KRH59732 | Soybean | endoplasmic reticulum, golgi | 44.18 | 38.46 |
| HORVU3Hr1G096290.4 | Barley | plastid | 53.01 | 37.5 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 26.91 | 22.95 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 26.91 | 22.95 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 26.51 | 22.6 |
| HORVU3Hr1G037050.3 | Barley | nucleus | 29.32 | 22.46 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 11.65 | 22.31 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 12.45 | 22.3 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 12.45 | 22.3 |
| HORVU0Hr1G022240.10 | Barley | mitochondrion | 21.69 | 20.61 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 12.45 | 19.87 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 9.64 | 19.67 |
| HORVU5Hr1G020290.3 | Barley | plastid | 12.05 | 19.61 |
| HORVU7Hr1G021120.1 | Barley | cytosol | 21.69 | 19.15 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 25.7 | 15.88 |
| HORVU4Hr1G067410.4 | Barley | plastid | 19.68 | 9.82 |
Protein Annotations
| EMBL:AK353819 | EnsemblPlants:HORVU5Hr1G121940.5 | EnsemblPlantsGene:HORVU5Hr1G121940 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 |
| PFAM:PF00650 | PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| TMHMM:TMhelix | UniParc:UPI0002004599 | UniProt:F2CQB7 | MapMan:35.1 | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CQB7]
Coordinates
chrchr5H:-:661052084..661053811
Molecular Weight (calculated)
28626.1 Da
IEP (calculated)
8.067
GRAVY (calculated)
-0.572
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCGTDERQH GHGGNGDAAE WKKVAELREV VEAQDPSAKE EDDFALRRFL RARDHNINKA SAMLLRYLAW KRVAKPHGFI SDDEVRGEIA KGRDRLQGFD
101: RLGRPMSYLY GGRHFPVRRD HEDLKRYVAY VLDKICTRLP AGQEKFAAVI DLKGWGYANC DIRGYLAGLD IMQSYYPERL GRVFLIHVPY IFMAAWKMVY
201: PFIDDKTKKK FVFVADKDLD ATLRDAIDES QLPEEYGGNL KLQAYNSSP
101: RLGRPMSYLY GGRHFPVRRD HEDLKRYVAY VLDKICTRLP AGQEKFAAVI DLKGWGYANC DIRGYLAGLD IMQSYYPERL GRVFLIHVPY IFMAAWKMVY
201: PFIDDKTKKK FVFVADKDLD ATLRDAIDES QLPEEYGGNL KLQAYNSSP
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.