Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_01s0011g05790.t01 | |
| VIT_04s0008g05610.t01 | |
| VIT_13s0019g04710.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01630.1 | VIT_01s0011g05790.t01 | AT1G68060.1 | 21798944 |
| AT1G01630.1 | VIT_13s0019g04710.t01 | AT3G54850.1 | 21798944 |
| AT1G01630.1 | VIT_04s0008g05610.t01 | AT4G32190.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032645.1-P | Field mustard | cytosol | 63.82 | 67.97 |
| Bra033247.1-P | Field mustard | cytosol | 67.48 | 65.1 |
| CDX90047 | Canola | cytosol | 67.48 | 65.1 |
| CDY15164 | Canola | cytosol | 66.26 | 63.92 |
| GSMUA_Achr8P00480_001 | Banana | cytosol | 56.91 | 62.5 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 65.04 | 62.5 |
| AT1G01630.1 | Thale cress | cytosol | 64.63 | 62.35 |
| CDY38020 | Canola | cytosol | 65.45 | 61.45 |
| GSMUA_Achr11P... | Banana | cytosol | 56.5 | 56.5 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 59.76 | 55.89 |
| TraesCS5B01G552400.1 | Wheat | cytosol | 52.85 | 53.06 |
| TraesCS4A01G333500.1 | Wheat | cytosol | 50.0 | 52.34 |
| TraesCS5D01G538300.1 | Wheat | cytosol | 54.06 | 52.16 |
| TraesCS5B01G552100.1 | Wheat | cytosol | 50.41 | 51.24 |
| TraesCS5D01G538500.1 | Wheat | cytosol | 50.81 | 51.02 |
| TraesCS5B01G551900.1 | Wheat | cytosol | 52.85 | 50.98 |
| TraesCS5D01G538600.1 | Wheat | cytosol | 49.59 | 50.41 |
| TraesCS5B01G451100.1 | Wheat | cytosol | 51.22 | 50.4 |
| HORVU5Hr1G121940.5 | Barley | cytosol | 50.81 | 50.2 |
| TraesCS4A01G333800.1 | Wheat | cytosol | 52.03 | 50.2 |
| EER90511 | Sorghum | cytosol | 50.81 | 50.0 |
| TraesCS5B01G552300.1 | Wheat | cytosol | 49.19 | 50.0 |
| Os03t0850700-01 | Rice | cytosol | 52.44 | 49.43 |
| TraesCS3A01G440900.1 | Wheat | cytosol | 49.19 | 49.19 |
| HORVU5Hr1G122080.1 | Barley | cytosol | 49.19 | 48.99 |
| Zm00001d042274_P001 | Maize | cytosol | 49.59 | 48.61 |
| TraesCS3B01G475000.1 | Wheat | cytosol | 48.37 | 48.37 |
| EES02004 | Sorghum | cytosol | 48.37 | 48.37 |
| TraesCS3D01G433700.1 | Wheat | cytosol | 48.37 | 47.79 |
| TraesCS5B01G552200.1 | Wheat | cytosol | 48.37 | 46.67 |
| Zm00001d012847_P001 | Maize | cytosol | 52.03 | 46.38 |
| Zm00001d042275_P001 | Maize | cytosol | 45.94 | 45.02 |
| TraesCS3D01G433800.1 | Wheat | cytosol | 43.9 | 45.0 |
| Os01t0926800-01 | Rice | cytosol, mitochondrion | 45.12 | 44.94 |
| TraesCS3A01G441000.1 | Wheat | cytosol | 44.31 | 44.67 |
| TraesCS3B01G475100.1 | Wheat | cytosol | 43.09 | 44.35 |
| EES02002 | Sorghum | cytosol | 45.94 | 44.31 |
| TraesCS3A01G441100.2 | Wheat | cytosol | 43.09 | 44.17 |
| TraesCS5D01G538700.1 | Wheat | cytosol | 51.22 | 39.87 |
| HORVU5Hr1G121860.2 | Barley | plastid | 51.63 | 37.57 |
| HORVU3Hr1G096280.6 | Barley | plastid | 44.31 | 35.39 |
| HORVU3Hr1G096290.4 | Barley | plastid | 47.97 | 33.52 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 32.93 | 33.33 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 28.86 | 24.48 |
| Zm00001d009968_P001 | Maize | cytosol | 30.49 | 24.04 |
| Zm00001d034765_P001 | Maize | cytosol | 26.83 | 23.16 |
| VIT_08s0056g00730.t01 | Wine grape | cytosol | 27.24 | 21.14 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 26.42 | 20.63 |
| VIT_17s0000g08850.t01 | Wine grape | mitochondrion | 20.73 | 19.62 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 26.02 | 17.73 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 26.42 | 15.37 |
Protein Annotations
| EntrezGene:100252364 | wikigene:100252364 | Gene3D:3.40.525.10 | MapMan:35.1 | ProteinID:CBI29265 | ProteinID:CBI29265.3 |
| InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | UniProt:D7TFJ2 | EMBL:FN595770 |
| InterPro:IPR001251 | InterPro:IPR036865 | EntrezGene:LOC100252364 | wikigene:LOC100252364 | PFAM:PF00650 | PRINTS:PR00180 |
| PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF198 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TIGR:TC54745 | UniParc:UPI0001982AB4 | ArrayExpress:VIT_01s0150g00170 | EnsemblPlantsGene:VIT_01s0150g00170 | EnsemblPlants:VIT_01s0150g00170.t01 |
| unigene:Vvi.3275 | RefSeq:XP_002271441 | RefSeq:XP_002271441.1 | : | : | : |
Description
No Description!
Coordinates
chr1:-:22609300..22613650
Molecular Weight (calculated)
28054.0 Da
IEP (calculated)
8.573
GRAVY (calculated)
-0.308
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEANGLQD SLESNEIEKR KVGLMRARVE SADPSSKDLD DFMIRRFLRA RDLDIDKASA LLLKYLGWRR AFMPNGYISA SEIPNELAQN KLFMQGQDKK
101: GRPITVVYGA RHKPYKGNLE EFKRFVVYSL EKICASMPGG EEKFISIADI EGWGYTNSDI RAYLAALSIL QDCYPERLGK LFLVHVPYVF MTAWKVVYPF
201: IDSKTKKKII FVENKNIKST LLGDIDENQL PDVYGGKLPL VPIQDS
101: GRPITVVYGA RHKPYKGNLE EFKRFVVYSL EKICASMPGG EEKFISIADI EGWGYTNSDI RAYLAALSIL QDCYPERLGK LFLVHVPYVF MTAWKVVYPF
201: IDSKTKKKII FVENKNIKST LLGDIDENQL PDVYGGKLPL VPIQDS
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.