Factsheet for TraesCS4A01G333800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G498700.1
TraesCS6A01G180500.1
TraesCS6A01G298800.1
TraesCS6B01G328200.1
TraesCS6D01G164600.1
TraesCS6D01G278500.1
TraesCS7A01G001900.1
TraesCS7A01G200700.1
TraesCS7B01G107500.1
TraesCS7D01G001600.2
TraesCS7D01G204000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01630.1	TraesCS6A01G298800.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6B01G328200.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6D01G278500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7A01G200700.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7B01G107500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7D01G204000.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS4A01G498700.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7A01G001900.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7D01G001600.2	AT3G54850.1	21798944
AT1G01630.1	TraesCS6A01G180500.1	AT4G32190.1	21798944
AT1G01630.1	TraesCS6D01G164600.1	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G538300.1	Wheat	cytosol	94.12	94.12
TraesCS5B01G551900.1	Wheat	cytosol	94.12	94.12
TraesCS4A01G333500.1	Wheat	cytosol	69.02	74.89
Os03t0850700-01	Rice	cytosol	71.37	69.73
HORVU5Hr1G121860.2	Barley	plastid	91.76	69.23
EER90511	Sorghum	cytosol	66.67	68.0
Zm00001d012847_P001	Maize	cytosol	66.27	61.23
TraesCS3A01G441100.2	Wheat	cytosol	51.76	55.0
TraesCS3A01G440900.1	Wheat	cytosol	52.94	54.88
TraesCS3A01G441000.1	Wheat	cytosol	52.16	54.51
GSMUA_Achr4P15920_001	Banana	cytosol	56.08	54.37
VIT_01s0150g00170.t01	Wine grape	cytosol	50.2	52.03
Bra032645.1-P	Field mustard	cytosol	45.88	50.65
AT1G01630.1	Thale cress	cytosol	49.02	49.02
Bra033247.1-P	Field mustard	cytosol	48.63	48.63
CDX90047	Canola	cytosol	48.63	48.63
KRH41051	Soybean	cytosol	47.06	48.39
CDY15164	Canola	cytosol	47.84	47.84
VIT_17s0000g00130.t01	Wine grape	cytosol	47.84	47.66
CDY38020	Canola	cytosol	47.06	45.8
KRH54081	Soybean	cytosol	46.67	44.91
Solyc03g118150.2.1	Tomato	cytosol	47.45	44.65
PGSC0003DMT400036745	Potato	cytosol	47.06	44.28
KRH63881	Soybean	cytosol	45.1	43.56
Solyc06g068800.2.1	Tomato	cytosol	46.67	38.51
PGSC0003DMT400065724	Potato	cytosol	46.27	38.19
KRH59732	Soybean	endoplasmic reticulum, golgi	42.75	38.11
TraesCS4A01G259700.1	Wheat	cytosol	27.45	23.97
TraesCS4A01G259500.1	Wheat	cytosol	25.88	22.6
TraesCS4A01G259600.1	Wheat	cytosol	25.49	22.26
TraesCS3A01G181100.2	Wheat	nucleus	25.49	21.45
TraesCS7A01G094800.2	Wheat	cytosol	21.96	19.86
TraesCS4A01G395100.1	Wheat	cytosol	21.57	19.57
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	20.0	19.47
TraesCS6A01G302200.1	Wheat	nucleus	25.1	15.88
TraesCS4A01G065900.1	Wheat	cytosol	22.75	12.64

Protein Annotations

EnsemblPlants:TraesCS4A01G333800.1	EnsemblPlantsGene:TraesCS4A01G333800	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF158	PFAM:PF00650
PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:617094599..617097896

Molecular Weight (calculated)

29143.9 Da

IEP (calculated)

8.279

GRAVY (calculated)

-0.464

Length

255 amino acids

Sequence
(BLAST)

001: MDCGGEEQAR QNGHAGDGGD PAEWKKVAEL RAVVEAQDPA AKEEDDFMLR RFLRARDHNI SKASAMFLKY LSWKRGAKPR CSITEAEVRG ELVQDKLYIQ
101: GFDNTGRPMI YLFGNRHFAA KRDLEEFKRY VIYILDNTCT KLPAGQEKFA SVVDLKGWGY ANCDIRAKLA ALEIMQNYYP ERLGRVFLIH VPYVFMAAWK
201: MVYPFIDDNT KKKFVFVADK DLDGTLRDAI DLSQLPEQYG GKLRLEGYKS SSTTL

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.