Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G055200.1 | Wheat | cytosol | 92.12 | 92.12 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 91.1 | 91.1 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 89.73 | 89.73 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 87.67 | 87.67 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 80.48 | 80.48 |
| EER93541 | Sorghum | cytosol | 73.63 | 72.39 |
| Os03t0724100-01 | Rice | cytosol | 72.6 | 70.9 |
| KXG37682 | Sorghum | cytosol | 67.81 | 67.58 |
| Zm00001d033836_P001 | Maize | nucleus | 67.47 | 66.78 |
| KXG37681 | Sorghum | cytosol | 65.75 | 62.14 |
| Zm00001d033837_P001 | Maize | plastid | 60.27 | 59.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.82 | 57.19 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 54.45 | 56.79 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 53.42 | 53.79 |
| PGSC0003DMT400038571 | Potato | cytosol | 48.29 | 52.61 |
| KRH51858 | Soybean | nucleus, plastid | 35.96 | 51.72 |
| KRH15219 | Soybean | cytosol | 50.34 | 51.4 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 52.05 | 51.18 |
| Solyc02g085300.2.1 | Tomato | cytosol | 37.67 | 50.93 |
| CDX73146 | Canola | cytosol | 50.0 | 50.52 |
| KRH08288 | Soybean | cytosol | 51.03 | 50.34 |
| KRH69927 | Soybean | cytosol | 51.03 | 50.34 |
| KRH05807 | Soybean | cytosol | 50.34 | 50.17 |
| AT1G75170.1 | Thale cress | cytosol | 50.68 | 50.0 |
| Solyc12g089130.1.1 | Tomato | cytosol | 39.73 | 49.79 |
| KRH61179 | Soybean | cytosol | 30.82 | 49.72 |
| CDY24776 | Canola | cytosol | 49.66 | 49.49 |
| Bra010566.1-P | Field mustard | cytosol | 49.66 | 49.49 |
| PGSC0003DMT400013200 | Potato | cytosol | 48.63 | 49.48 |
| CDY35466 | Canola | cytosol | 48.63 | 48.46 |
| Solyc04g080290.2.1 | Tomato | cytosol | 47.6 | 48.43 |
| Bra011696.1-P | Field mustard | nucleus | 47.95 | 48.28 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 51.37 | 47.62 |
| CDY65854 | Canola | nucleus | 46.92 | 47.4 |
| AT4G36640.3 | Thale cress | cytosol | 47.6 | 47.28 |
| CDY42697 | Canola | cytosol | 46.58 | 47.06 |
| CDX72592 | Canola | cytosol | 46.23 | 46.71 |
| Bra017768.1-P | Field mustard | cytosol | 46.23 | 46.71 |
| CDX75583 | Canola | cytosol | 23.63 | 43.95 |
| Bra015863.1-P | Field mustard | cytosol | 50.0 | 38.02 |
| CDY45413 | Canola | cytosol | 50.0 | 37.92 |
| TraesCS3A01G181100.2 | Wheat | nucleus | 38.36 | 36.96 |
| TraesCS4A01G395100.1 | Wheat | cytosol | 31.51 | 32.74 |
| TraesCS7A01G094800.2 | Wheat | cytosol | 30.82 | 31.91 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 39.38 | 28.54 |
| TraesCS4A01G333500.1 | Wheat | cytosol | 22.95 | 28.51 |
| TraesCS3A01G441100.2 | Wheat | cytosol | 22.95 | 27.92 |
| TraesCS3A01G440900.1 | Wheat | cytosol | 22.95 | 27.24 |
| TraesCS3A01G441000.1 | Wheat | cytosol | 22.26 | 26.64 |
| TraesCS4A01G333800.1 | Wheat | cytosol | 22.6 | 25.88 |
| TraesCS7A01G460600.1 | Wheat | mitochondrion, plastid | 17.12 | 19.08 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 22.6 | 14.38 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G259500.1 | EnsemblPlantsGene:TraesCS4A01G259500 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | PRINTS:PR00180 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TIGR:cd00170 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:572535158..572539686
Molecular Weight (calculated)
33646.1 Da
IEP (calculated)
8.428
GRAVY (calculated)
-0.588
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MFWRKQASHF DLDDAEQRQA KIKELRAALG PLSACGEKYC NEACLVRYLE ARNWNVDKSR KMLEESLKWR AARRPEDIHW PDVSVEAETG KMYRAPFTDR
101: EGRTVIVMRP AKQNTSSHEG QLQYLTYTLE NAALNLPQGQ DKMVWLIDFT GWTLAHRSPF KTSRESISTV QNHYPERLSA AFMFNPPKIF EASFKVLKVL
201: IDPKSAQKLN FVYKENEESM KTMYNHIDPE VLPVEFGGKN NVVYNHEDYS KLMTKDDIKT ASFWAADVNH VINVDSVPEV KPKPSLIVAK AS
101: EGRTVIVMRP AKQNTSSHEG QLQYLTYTLE NAALNLPQGQ DKMVWLIDFT GWTLAHRSPF KTSRESISTV QNHYPERLSA AFMFNPPKIF EASFKVLKVL
201: IDPKSAQKLN FVYKENEESM KTMYNHIDPE VLPVEFGGKN NVVYNHEDYS KLMTKDDIKT ASFWAADVNH VINVDSVPEV KPKPSLIVAK AS
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.